| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2490 |
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| Symbol | |
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| ID | 8253597 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2888995 |
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| End bp | 2890359 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644936140 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_003092756 |
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| Protein GI | 255532384 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0635] Coproporphyrinogen III oxidase and related Fe-S oxidoreductases |
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| TIGRFAM ID | [TIGR00538] oxygen-independent coproporphyrinogen III oxidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.0219656 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACACTA ATATTATCAG ACAAAAATAC CATATTGCCG CCCCCCGTTA CACCAGTTAT
CCTACAGTAC CTTATTGGAA CGAAGATAAT TTTAATGCCG ATGAATGGTG CAGCGCTGTT
GTGGGCTCAT TCGATGAAAG CAATCAAAAG GATGGCATCA GCTTATACAT CCACCTACCT
TTTTGCGAAA GCCTGTGTAC CTATTGTGGC TGCAACACCA GGATCACAAA GAACCACCAG
GTAGAAAAAC CTTATGTCGA TACCCTCTTA AAAGAATGGC AGCTTTATTT AAAACAGTTT
AAAACCAAAC CGCTCATCAG GGAATTACAT CTCGGAGGAG GTACACCAAC TTTTTTTAAT
GCCCAAAACC TCGAATTTTT AATTAAGGGT ATATTGAAGG ATGCTGTTGT GCATAAAGAT
GCGGCATTTA GCTTTGAAGC GCATCCGGCA AATACAACAA CCGAACATCT GATCACCTTA
AACCAGCTGG GCTTCACCAG GCTGAGTCTT GGTATCCAGG ATTTTGACCC AAGGGTACAA
CTGATCATCA ACAGGGTACA AACGGTAGAG CAGGTAGAAC AAATCTCCCG GAAGGCACGC
GAAAATGGCT ATAAGTCTCT TAATTACGAC CTGATCTATG GCTTGCCGCA TCAAAGCTTT
TCAGGCCTTG CCGATACCAT TGAAGAGGTA TTGAGGTTAA GACCGGACCG GATTGCCTTC
TACAGCTATG CCCATGTGCC CTGGGTTAAA CCAGGTCAGC GCCGTTATAC AGAAAGTGAT
TTGCCCGCTC CTGAATCTAA AGAAGAGTTG TATAAGCTGG GCCGCAAACT CCTCAAAGAA
GGTGGCTATA CTGAAATCGG AATGGACCAT TTTACTTTGA CAACGGATAG CCTGTACGAA
GCGGATCAAA AGGGCAGTCT GCACCGCAAT TTTATGGGCT ATACAGACCA GTACAGCCGG
TTAACCATAG GCCTGGGGGT ATCTGCGATC AGCGACAGCT GGAATGCCTT TGCCCAGAAT
GTAAAGACTG TCGAAACCTA TACCGATATG GTAAACAAGG GATTGTTCCC GGTATTTAAA
GGGCACCTCT TAACTGAAAC GGATCTGCTG ATCCGCAAAC ATATTCTGAA CATCATCTGC
CGCGGGTATA CTTCATGGAC TTTGGCAGAA GAAGAAAATG AGGCCCTGGC AGAGGGACTG
ATCAGAATGC GCTGGCTCGC TCAGGACGGG TTAGTGTTTT TATCGGCCGG TGAATTGCGT
GTCACCGGAT TTGGTAAACG TTTCCTGAGA AATATATGTA TGACGCTGGA TGCCCGGTTG
TGGGAAAAAC AACCTGAAAA GCAGGTATTC AGTATGGCAG ATTAA
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| Protein sequence | MNTNIIRQKY HIAAPRYTSY PTVPYWNEDN FNADEWCSAV VGSFDESNQK DGISLYIHLP
FCESLCTYCG CNTRITKNHQ VEKPYVDTLL KEWQLYLKQF KTKPLIRELH LGGGTPTFFN
AQNLEFLIKG ILKDAVVHKD AAFSFEAHPA NTTTEHLITL NQLGFTRLSL GIQDFDPRVQ
LIINRVQTVE QVEQISRKAR ENGYKSLNYD LIYGLPHQSF SGLADTIEEV LRLRPDRIAF
YSYAHVPWVK PGQRRYTESD LPAPESKEEL YKLGRKLLKE GGYTEIGMDH FTLTTDSLYE
ADQKGSLHRN FMGYTDQYSR LTIGLGVSAI SDSWNAFAQN VKTVETYTDM VNKGLFPVFK
GHLLTETDLL IRKHILNIIC RGYTSWTLAE EENEALAEGL IRMRWLAQDG LVFLSAGELR
VTGFGKRFLR NICMTLDARL WEKQPEKQVF SMAD
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