| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2484 |
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| Symbol | |
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| ID | 8253591 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2883304 |
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| End bp | 2885457 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 644936134 |
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| Product | putative bifunctional cbb3-type cytochrome c oxidase subunit I/II |
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| Protein accession | YP_003092750 |
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| Protein GI | 255532378 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3278] Cbb3-type cytochrome oxidase, subunit 1 |
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| TIGRFAM ID | [TIGR00780] cytochrome c oxidase, cbb3-type, subunit I
[TIGR00781] cytochrome c oxidase, cbb3-type, subunit II |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.102603 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCCGGTA ATTTTACATC CATAAACATT CATTATTTTA ACATGACTGA AAAATTTTAC
TACGACAACA AGATCGTCAG AAACTTTGCC ATCGCCACCA TAGCATGGGG CATTATCGGC
ATGACGGTAG GATTGCTCAT TGCCATGCAG TTGTTTAAGC CTGCGTTAAA TATGGGATCA
CAGTACACTA CGTTTGGGCG TATCCGTCCG CTGCACACCA ACGCGGTCAT TTTCGCCTTT
GTAGGAAATG CCATATTTAT GGGCGTTTAT TATTCTTTAC AGCGATTGCT GAAAGCGCGC
ATGTTTAGTG ATGTGCTCAG TAAAATACAT TTCTGGGGCT GGCAGCTCAT CATTATTTCG
GCTGTAATTA CACTTCCCTT GGGTTTAACC TCCTCACATG AATATGCCGA ACTGGAATGG
CCCATAGACA TTGCGATTAC CCTGATATGG GTGGTATTTG GCGTAAATAT GTTCGGAACC
ATTATTAAGC GCCGCGAAAA ACACATGTAT GTGGCCATCT GGTTTTACAT TGCCACCTTT
GTTACCGTAG CTGTACTGCA CATTGTAAAC TCATTTGAGC TGCCTGTATC GGCTTTTAAA
AGCTATTACC TGTATGCAGG TGTACAGGAT GCACTGGTAC AATGGTGGTA TGGCCACAAT
GCTGTTGCTT TCTTTTTAAC TACACCCTAC CTGGGCATGA TGTATTATTT CCTGCCTAAA
ATGGCCCAAA GGCCGATATA TTCCTATAAA CTGAGTATCC TGCATTTCTG GTCGCTCATT
TTCATTTACA TCTGGGCCGG TCCGCACCAC CTGTTGTATA CTTCCCTTCC GGGCTGGGCA
CAATCGCTGG GTGTGGCCTT TTCTGTTATG CTCATTGCAC CAAGCTGGGG CGGGATGATC
AATGGCCTGC TTACCCTGCG TGGTGCATGG GACAAGGTAC GGGAAGACGC GACGCTCAAA
TTTATGGTAG TGGGCATAAC CGCTTATGGT ATGGCTACTT TTGAAGGTCC GATGCTGGCC
TTAAAACAGA TCAATGCCAT TGCACATTAT ACCGACTGGA TTGTTGCGCA TGTACATGTT
GGCGCACTGG GCTGGAATGG CTTTCTTACC TTCGGCATTT TGTACTGGCT GATCCCAAGG
ATCTACCGGA CTTCCCTGTA TTCCAAAAAG CTGGCTTCCT TCCATTTCTG GATCGGTACG
CTGGGCATTA TTTTTTATGC CGTGCCCCTG TATTTTGCCG GGTTTACACA AGGACTGATG
TGGAAAGAGT TTACAGAAGA AGGTATGCTG AGGTACCCAA ATTTTCTGGA AACCGTACTG
CAGATCTTGC CGATGTACGT ATTGAGGGCC ATAGGTGGCG GTTTATACCT GATTGGTGTG
ATTGTGATGA CCTATAACCT GATCAAAACG GTAGGTACAG GTAAACTGCT GGCCAATGAA
CCGGCCGAGG CCCCTGCCCT GCCCGAAAAC TACCAGCCGC AGGGCTCTGA CAAAAAACTG
CACCGTATGC TGGAGCGCAA ACCAATGGTA TTTTTAGTGC TTTCGCTGGT TGTGATCCTG
ATTGGAGGTA TGGTAGAAAT GATGCCCACT TTTACCATCA AATCCAATAT CCCTACCATC
AGCAGTGTAA AACCTTATAC CCCACTTGAA TTACAGGGCA GGGACCTTTA CATCAAAGAA
GGCTGTGTAA GCTGCCATTC GCAGATGATC CGTCCTTTCC GTTCAGAAAC AGAACGGTAT
GGGGAGTACA GCAAGGCCGG GGAATTTGTG TACGACCACC CGCATTTATG GGGTTCCAAA
CGCACGGGCC CTGATTTGCA GCGTGAGGGT GGAAAATACG GAAATGCATG GCATTTTAAC
CACATGATGG ACCCGCAGAC CATGTCGCCC GGCAGTATCA TGCCGCCATA CGAATGGCTG
GTAACCCAAA GCCTGGATAC GAGCACTACC CGCAGCAAGA TCAATGCCAT GCGGACATTG
GGTGTGCCTT ACGAAGCCGG CTATGAAAAC AGGGCGAACC GGGACCTGGA CGCACAGGCC
AGGGCAATTG CAGATGACCT GCAGAAAAAC AACATCAAAG TAAAGAGCGA TAAGGAGATC
ATTGCCCTGA TTGCCTATTT ACAGCGATTG GGAACAGACA TTAAAGCAAA GTAA
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| Protein sequence | MPGNFTSINI HYFNMTEKFY YDNKIVRNFA IATIAWGIIG MTVGLLIAMQ LFKPALNMGS
QYTTFGRIRP LHTNAVIFAF VGNAIFMGVY YSLQRLLKAR MFSDVLSKIH FWGWQLIIIS
AVITLPLGLT SSHEYAELEW PIDIAITLIW VVFGVNMFGT IIKRREKHMY VAIWFYIATF
VTVAVLHIVN SFELPVSAFK SYYLYAGVQD ALVQWWYGHN AVAFFLTTPY LGMMYYFLPK
MAQRPIYSYK LSILHFWSLI FIYIWAGPHH LLYTSLPGWA QSLGVAFSVM LIAPSWGGMI
NGLLTLRGAW DKVREDATLK FMVVGITAYG MATFEGPMLA LKQINAIAHY TDWIVAHVHV
GALGWNGFLT FGILYWLIPR IYRTSLYSKK LASFHFWIGT LGIIFYAVPL YFAGFTQGLM
WKEFTEEGML RYPNFLETVL QILPMYVLRA IGGGLYLIGV IVMTYNLIKT VGTGKLLANE
PAEAPALPEN YQPQGSDKKL HRMLERKPMV FLVLSLVVIL IGGMVEMMPT FTIKSNIPTI
SSVKPYTPLE LQGRDLYIKE GCVSCHSQMI RPFRSETERY GEYSKAGEFV YDHPHLWGSK
RTGPDLQREG GKYGNAWHFN HMMDPQTMSP GSIMPPYEWL VTQSLDTSTT RSKINAMRTL
GVPYEAGYEN RANRDLDAQA RAIADDLQKN NIKVKSDKEI IALIAYLQRL GTDIKAK
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