| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2474 |
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| Symbol | |
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| ID | 8253581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2868476 |
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| End bp | 2870176 |
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| Gene Length | 1701 bp |
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| Protein Length | 566 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 644936124 |
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| Product | glucose-methanol-choline oxidoreductase |
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| Protein accession | YP_003092740 |
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| Protein GI | 255532368 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG2303] Choline dehydrogenase and related flavoproteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.826754 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACATCA ATACAGATTT AAAGAAAGAA AATACATACG ATGCTATCGT CATAGGATCG
GGGATCAGTG GCGGCTGGGC TGCAAAAGAA CTTACAGAAA AAGGCCTCAG GGTGCTGATG
CTGGAACGGG GAATGAACAT AGAGCATGTG AAGGACTATG ATTCTGCCAT GAAAAACCCA
TGGGAGTTCC AGCATGCAGG CAAACTCACC GAAGAGCAAA AAAGAACTCA CCCTGTTCAG
AAAAGGGACT ATCCTTATCA GGAAGCAAAT GAAAAATGGT GGGTAAACGA CCTGGAATGC
CCTTATACTG AAGACAAGCG TTTCGACTGG TACCGCGGGT TCCATGTGGG TGGCAAATCC
TTAATGTGGG GCCGTCAGAG CTACCGGTTC AGCGACCATA ATTTTGAGGA CAATGCCAGG
GATGGGCATG GAAACGACTG GCCCATCCGC TATAAAGATA TTGCCCCATG GTACGATTAT
GCCGAACGTT TTGCCGGTAT CAGCGGTCAG GCCGAAAACT GGCCATTATT ACCCGACGGA
CAGTTCCTGC CACCTATGGA CCTGAACTGT GTAGAGAAAT CTGTTAAAAA ACGCATTGAA
GAGCATTACA AAAGAACACG GATCATGACC ATTGGCCGTG TAGCAAATTT AACTGTTCCG
CATAAAGGGC GTGGCAATTG CCAGTACCGT AACCTCTGCA GTCGTGGCTG TCCTTTTGGT
GCTTATTTCA GTACACAATC TTCTACCTTA CCGGCAGCCC AGGCTACAGG CAGGCTCACC
CTAAGGCCTT ATTCCATCGT TAACCATATC ATTTACGATA AAAACACCAA AAAGGCCAAA
GGTGTAATGG TGATAGATGC GGAAACGCAG AAAACAATGG AATTCTATGC AAAAATTGTT
TTTGTAAATG GTTCTACCTT AGGTTCCACA TTTATCCTTT TGAACTCTAC TTCCGAAGCA
CACCCTAACG GTCTGGGCAA TGGAAGCGGA CAACTGGGCC ATAACCTGAT GGACCACCAT
TTCCGTTGCG GTGCATCGGC TGAAGCGCTT GGTTTTGAAG ATAAATATAC CTTCGGTCGC
CGTGCAAACG GGATTTATGT GCCCCGGTAC CGCAATGTCG GCAGCGATAA ACGTGATTAT
TTACGTGGCT TTGGCTACCA GGGTGGTGCC AGCCGGAAAA ACTGGCAAAG TGATGTGGCG
GAACTGGCCA TAGGTGCTGA TTTTAAAGAT AAAATGAACA AACCAGGGGC CTGGACTATG
GGCCTGGGCG GCTTTGGAGA AATGTTGCCT TACTATGAAA ACCGGGTTTA CATCGATAAA
ACCAAAAAAG ACAAATGGGG ACAGCCGGTA CTGGCTATTG ATTGTGAGTA CAAGGAGAAC
GAGAAAAAGA TGCGTATCGA TATGATGAAC GATGCCGCCG AAATGCTGGA AGCAGCAGGC
ATGAAAAACA TCAAAACCTA TGACAATGGT TGTTATCCGG GTATGGCCAT CCATGAAATG
GGAACCGCCA GAATGGGGAA TGACCCGAAA ACATCGGTGC TCAACAAATG GAACCAAATG
CATGAAGTCA GCAATGTATT CGTTACTGAT GGTTCCTGTA TGCCATCTAT TGCCTGTCAG
AACCCATCTT TAACCTTTAT GGCATTAACT GCGCGTGCAT CCGATTATGC GGTTAAAGAA
TTGAAGAAAG GGAATATTTA A
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| Protein sequence | MNINTDLKKE NTYDAIVIGS GISGGWAAKE LTEKGLRVLM LERGMNIEHV KDYDSAMKNP
WEFQHAGKLT EEQKRTHPVQ KRDYPYQEAN EKWWVNDLEC PYTEDKRFDW YRGFHVGGKS
LMWGRQSYRF SDHNFEDNAR DGHGNDWPIR YKDIAPWYDY AERFAGISGQ AENWPLLPDG
QFLPPMDLNC VEKSVKKRIE EHYKRTRIMT IGRVANLTVP HKGRGNCQYR NLCSRGCPFG
AYFSTQSSTL PAAQATGRLT LRPYSIVNHI IYDKNTKKAK GVMVIDAETQ KTMEFYAKIV
FVNGSTLGST FILLNSTSEA HPNGLGNGSG QLGHNLMDHH FRCGASAEAL GFEDKYTFGR
RANGIYVPRY RNVGSDKRDY LRGFGYQGGA SRKNWQSDVA ELAIGADFKD KMNKPGAWTM
GLGGFGEMLP YYENRVYIDK TKKDKWGQPV LAIDCEYKEN EKKMRIDMMN DAAEMLEAAG
MKNIKTYDNG CYPGMAIHEM GTARMGNDPK TSVLNKWNQM HEVSNVFVTD GSCMPSIACQ
NPSLTFMALT ARASDYAVKE LKKGNI
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