| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2472 |
|---|
| Symbol | |
|---|
| ID | 8253579 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 2866291 |
|---|
| End bp | 2867394 |
|---|
| Gene Length | 1104 bp |
|---|
| Protein Length | 367 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644936122 |
|---|
| Product | UBA/THIF-type NAD/FAD binding protein |
|---|
| Protein accession | YP_003092738 |
|---|
| Protein GI | 255532366 |
|---|
| COG category | [H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0476] Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 14 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 25 |
|---|
| Fosmid unclonability p-value | 0.935376 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAGCCGT TTGGAAAGAT TGGGACAACA GTTTGGTTTA AGGAAATGGA AAATCAGAAA
CGTTACGACA GGCAGGTCAT CCTTCCGGAA ATTGGCCTGG ATGGGCAGCA AAAACTTAAA
AATGCGAGGG TGCTTGTTAT TGGGGCGGGT GGCCTGGGCT GTCCCCTGCT CCTGTACCTT
GCCGCTGCAG GTATAGGCCA TATGGGCATA GCCGACCATG ATGTGGTGGA CGAGAGCAAC
CTGCAGCGGC AGATTTTATA CCAGATGGCG GATATAGGAG GCTTAAAAGC CGAAATTGCG
GTAAACAAGC TTGGCTTGCT GAACCCGGAT GTGGATTTCA GGGCTTATCC CTTTAAACTG
GGTATGGAAA ATGCGGCTGA ACTGATTGCT GTCTACGACC TGATCATCGA TGGTTCTGAC
AATTTCCCTA CCCGCTACCT GGTAAATGAT ACCTGTGTGG CCTTAAATAA AACACTGGTA
TTTGGTTCTA TATTTCGATT TGAAGGGCAG GTAACGGTAT TTAATCATAA AGGGGGACCA
GATTACCGTT CCCTTTACCC CGAGCCACCG GCAGCAACTG AAATGCCCAA TTGTGCTGAA
GCCGGGGTAA TTGGTACGTT GCCCGGAATT ACAGGCACCT TAATGGCCAA TGAGGCCATC
AAGATCATTT GTGGCTTTGG TGAGGTATTG TCGGGGAAAC TGCTGCTGTT TAATGCACTG
AACAATGAAA TGCAGGTATT TGGCTTTGGC AGTCACAATG TGCAAAACCG GCGCGCTGTA
GGGCAGAAAG GAAAGATGGA TGTACCGGCC CTGCCCGGAC CACATGAAAT CAGCCCCGGT
CAGCTCGCAG AATGGAAAAA TGAAAACATA GCGTATCAGC TGATAGACGT AAGGGAAGCT
TATGAATACG AAGAATACCA TATTGGTGGC ATCAATATCC CCCTTTATGA ATTAAGCCAG
CACATCCCCG CCCTGCTTCA GTATGAAAAG ATCGTTTTTT GCTGTGCTTC AGGAACAAGG
AGCAAAATTG CACTAAACCT GATGAAGAAT AATCATAAAG CTGAGTGCTA TACTTTAATC
GTTTCTGCAA ATCAGCAAAC ATAA
|
|---|
| Protein sequence | MKPFGKIGTT VWFKEMENQK RYDRQVILPE IGLDGQQKLK NARVLVIGAG GLGCPLLLYL
AAAGIGHMGI ADHDVVDESN LQRQILYQMA DIGGLKAEIA VNKLGLLNPD VDFRAYPFKL
GMENAAELIA VYDLIIDGSD NFPTRYLVND TCVALNKTLV FGSIFRFEGQ VTVFNHKGGP
DYRSLYPEPP AATEMPNCAE AGVIGTLPGI TGTLMANEAI KIICGFGEVL SGKLLLFNAL
NNEMQVFGFG SHNVQNRRAV GQKGKMDVPA LPGPHEISPG QLAEWKNENI AYQLIDVREA
YEYEEYHIGG INIPLYELSQ HIPALLQYEK IVFCCASGTR SKIALNLMKN NHKAECYTLI
VSANQQT
|
|---|
| |