| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2471 |
|---|
| Symbol | |
|---|
| ID | 8253578 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 2865213 |
|---|
| End bp | 2866331 |
|---|
| Gene Length | 1119 bp |
|---|
| Protein Length | 372 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 644936121 |
|---|
| Product | thiazole biosynthesis protein ThiH |
|---|
| Protein accession | YP_003092737 |
|---|
| Protein GI | 255532365 |
|---|
| COG category | [H] Coenzyme transport and metabolism
[R] General function prediction only |
|---|
| COG ID | [COG1060] Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes |
|---|
| TIGRFAM ID | [TIGR02351] thiazole biosynthesis protein ThiH |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGTAGTT TCAATGATAT TTTTAAAGCC TGCAGCTGGG AAGAAACCAG TAACAGCATT
TACGCAAAGA CCAGTGCGGA TGTGGAACGG GCCCTGGCTT GGGGTACAGC TAAAAGAACG
CTGGAAGATT TTAAAGCACT GCTCTCTCCT GCTGCTGCAC CTTACCTGGA ACAGATGGCC
GAAATAAGCC GGCAGCTTAC CTTAAAACGC TTTGGGCGGG TGCTGCAAAT GTATGTGCCC
CTGTACCTTT CCAATGAATG CAACAACATC TGCACGTATT GCGGCTTTAG CTACGACAAT
AAAGTGAGGC GCAAGACCCT CTCTCCTATA GAGATCATGC AGGAAGTGGC GGCTATTAAA
GAAATGGGTT TCGATCATGT ATTGCTGGTT ACGGGCGAGG CCAGCCAGTC GGTACATACC
GCTTATTTTA AACAGGTGCT GGAACTGATC CGTCCGCATT TTGCGCAGAT CTCTATGGAA
GTTCAGCCTT TAGACCTGGC CGATTACGAA GAGCTACGAC CCTATGGTTT AAATACCGTG
CTGGTATATC AGGAAACCTA TCACCAGGAA GATTATAAAA AGCATCACCC CAGGGGTAAG
AAATCCAATT TCCTGTACCG GCTGGAAACG CCCGACCGGC TGGGCCAGGC AGGCATACAT
AAAATAGGCC TGGGGGTGTT GATTGGCCTG GAGGACTGGC GTACGGATTC ATTTTTTACG
GCTTTGCACC TGGATTACCT GGAAAAAACC TACTGGCAAA GCAAATACAG CATTTCATTT
CCGAGGTTGC GGCCTTTTAG CGGGGGGCTG GAGCCTAAGG TGGCGATGAG CGACAGGGAG
CTGGTGCAGC TGATCTGCGC TTACCGCTTG TTTAATGAGG AGGTTGAGCT GTCCATCTCG
ACCAGGGAAT CGCAGGTATT CAGGGACAAT ATCATTAAGC TGGGCATTAC TGCCATGAGT
GCAGGTTCTA AGACCAATCC CGGTGGCTAT GTGGTAGAAC CGGCCTCGCT GGAGCAGTTT
GAGATATCGG ACGAGCGCAG TGCAAAAGAA ATTGCGGCCA TGCTTGCACA GCAGGGCTAT
GAAGCCGTTT GGAAAGATTG GGACAACAGT TTGGTTTAA
|
|---|
| Protein sequence | MGSFNDIFKA CSWEETSNSI YAKTSADVER ALAWGTAKRT LEDFKALLSP AAAPYLEQMA
EISRQLTLKR FGRVLQMYVP LYLSNECNNI CTYCGFSYDN KVRRKTLSPI EIMQEVAAIK
EMGFDHVLLV TGEASQSVHT AYFKQVLELI RPHFAQISME VQPLDLADYE ELRPYGLNTV
LVYQETYHQE DYKKHHPRGK KSNFLYRLET PDRLGQAGIH KIGLGVLIGL EDWRTDSFFT
ALHLDYLEKT YWQSKYSISF PRLRPFSGGL EPKVAMSDRE LVQLICAYRL FNEEVELSIS
TRESQVFRDN IIKLGITAMS AGSKTNPGGY VVEPASLEQF EISDERSAKE IAAMLAQQGY
EAVWKDWDNS LV
|
|---|
| |