Gene Phep_2459 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2459 
Symbol 
ID8253566 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2854383 
End bp2855201 
Gene Length819 bp 
Protein Length272 aa 
Translation table11 
GC content44% 
IMG OID644936109 
ProductUspA domain protein 
Protein accessionYP_003092725 
Protein GI255532353 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.564309 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCATAA TTGTAGCGAC AGATTTCTCG GAAGTGGCAG AAAATGCTGT AGAATATGCA 
GCGGCGATAG CCAGACACAG CAATGCAAGA CTGATCCTTT TTAATTCTTT CGTGATCCCG
ATACATGCGG CAAATACCCT TTTACCGGCT TCCAGTATCC AGAGATTGCT GACAGATAAC
GAGATCAGAC TGATAGAACG CGCCCTGACA CTTTCATTGG ATTATGACAT AGAAGTAGGG
CATGAAACTG CATTTTCTTT TGTAGAAGAT GAACTGAAGC AGCTGCTGGT TAAATACGAG
GCCAGCCTGG TGGTGTTGGG CATGACGGCC AAGACCCTTG AACAGGACCT TTGGGGAAAT
ACCACTACTT CGGCAATCAA GAAATTAAAG TTTCCGGTAT TGGCTGTGCC CCTTGGTGCT
AAATTTGAAG GGACAAAAAA AGTGCTTTTT GCCTGCGATG TACTGAATGG GGTGTCTGAA
AGGGTATTGG GACATGTCAA AGAACTGGCT TTGAGCTTAG CTGCTGAAGT AGAGGTTTTT
AATGTAGATA AAACCCTGGA AGAACTGCGG AATGAAGGCC CCGCTTTACT GGCCACCAAT
GCCATAGATG ACGGGCTGGA AGGGATTGCC TATTACTATA AAAATGTGAA ATCGAATGCG
GTAATAGAAG AAATTGAAAA AGAAATAGAG ATATTTGGTG CCGATATGCT GATTATGGTA
CCTAAAAAAT ATGGTTTCTG GGCTTCTATG GTACACAAAA GCAAAACAAG GGTGATGGCA
TCCGGGCTGC ATATCCCGCT GCTTTCGATT CCTATCTAA
 
Protein sequence
MTIIVATDFS EVAENAVEYA AAIARHSNAR LILFNSFVIP IHAANTLLPA SSIQRLLTDN 
EIRLIERALT LSLDYDIEVG HETAFSFVED ELKQLLVKYE ASLVVLGMTA KTLEQDLWGN
TTTSAIKKLK FPVLAVPLGA KFEGTKKVLF ACDVLNGVSE RVLGHVKELA LSLAAEVEVF
NVDKTLEELR NEGPALLATN AIDDGLEGIA YYYKNVKSNA VIEEIEKEIE IFGADMLIMV
PKKYGFWASM VHKSKTRVMA SGLHIPLLSI PI