Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2459 |
Symbol | |
ID | 8253566 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2854383 |
End bp | 2855201 |
Gene Length | 819 bp |
Protein Length | 272 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644936109 |
Product | UspA domain protein |
Protein accession | YP_003092725 |
Protein GI | 255532353 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.564309 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCATAA TTGTAGCGAC AGATTTCTCG GAAGTGGCAG AAAATGCTGT AGAATATGCA GCGGCGATAG CCAGACACAG CAATGCAAGA CTGATCCTTT TTAATTCTTT CGTGATCCCG ATACATGCGG CAAATACCCT TTTACCGGCT TCCAGTATCC AGAGATTGCT GACAGATAAC GAGATCAGAC TGATAGAACG CGCCCTGACA CTTTCATTGG ATTATGACAT AGAAGTAGGG CATGAAACTG CATTTTCTTT TGTAGAAGAT GAACTGAAGC AGCTGCTGGT TAAATACGAG GCCAGCCTGG TGGTGTTGGG CATGACGGCC AAGACCCTTG AACAGGACCT TTGGGGAAAT ACCACTACTT CGGCAATCAA GAAATTAAAG TTTCCGGTAT TGGCTGTGCC CCTTGGTGCT AAATTTGAAG GGACAAAAAA AGTGCTTTTT GCCTGCGATG TACTGAATGG GGTGTCTGAA AGGGTATTGG GACATGTCAA AGAACTGGCT TTGAGCTTAG CTGCTGAAGT AGAGGTTTTT AATGTAGATA AAACCCTGGA AGAACTGCGG AATGAAGGCC CCGCTTTACT GGCCACCAAT GCCATAGATG ACGGGCTGGA AGGGATTGCC TATTACTATA AAAATGTGAA ATCGAATGCG GTAATAGAAG AAATTGAAAA AGAAATAGAG ATATTTGGTG CCGATATGCT GATTATGGTA CCTAAAAAAT ATGGTTTCTG GGCTTCTATG GTACACAAAA GCAAAACAAG GGTGATGGCA TCCGGGCTGC ATATCCCGCT GCTTTCGATT CCTATCTAA
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Protein sequence | MTIIVATDFS EVAENAVEYA AAIARHSNAR LILFNSFVIP IHAANTLLPA SSIQRLLTDN EIRLIERALT LSLDYDIEVG HETAFSFVED ELKQLLVKYE ASLVVLGMTA KTLEQDLWGN TTTSAIKKLK FPVLAVPLGA KFEGTKKVLF ACDVLNGVSE RVLGHVKELA LSLAAEVEVF NVDKTLEELR NEGPALLATN AIDDGLEGIA YYYKNVKSNA VIEEIEKEIE IFGADMLIMV PKKYGFWASM VHKSKTRVMA SGLHIPLLSI PI
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