Gene Phep_2455 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2455 
Symbol 
ID8253562 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2849876 
End bp2851192 
Gene Length1317 bp 
Protein Length438 aa 
Translation table11 
GC content45% 
IMG OID644936105 
ProductATP-binding region ATPase domain protein 
Protein accessionYP_003092721 
Protein GI255532349 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0530823 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.690452 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAACTAT CTGCCAAATT AATCCTGTTC ATTACCAGCT CAAAGCTAGC TGTAGTGCTG 
CTGTTTGTCA TTTCCCTCCC TTTCCTCGTT AACGGCATCG TATCCGAATA CATCAGTTAT
TCTTTGCGCC TGCAGCAGGA TAAAGTCATC CGTATCATCC ATAAAAACGG CATCAACTAT
TACCTGCAGG GCGACAATAA CTATGGCAGC TATACCATGC TCAAAGAAGA ATACATCGCC
CTCGAGCCTT CAACAGCAAA TACCCGTATC GATACCATAA AAACGGCCAA ACGTCTGGTA
GAAAGGGATA CGCTCAATTA CAGGATCCTG ATGCATACCT TTAATTATGA AGGAAAAAAT
TACCTGCTCG AAATCGGAAA AACGACTTCC AGCATCAACC AGTACAACAA GCCCCTGCAA
AGACTGGCCC TGTATGTACT CATGGGCCTC ATCGCCCTGA GCCTGCTGTT CGACCTGCTT
TTTACCCGTG CACTCATCAG GCCACTCGGA AAAATCATCA AATCAAAGCT CATCGACAGG
AAATTTCCTT TCAAAAACCA TCCTGCACCC ATACGCACCT CTACGTACGA TTTTAAATAC
CTCGATGAAT CCCTGATCCT GCTCATGGAA CAGATCAATG AAGCTTTCGA GAAAGAACGG
GAATTTACCG CCAATGCCTC CCATGAGCTC ATGACCCCCA TCAGCATCCT GCAAAATAAA
ATGGAAAACC TGATTGGTGA TGAACAGCTG AACGAGGAAG CAGTCGTAAA AATTGCCGAT
ATGATGAAAA CGCTCGACCG GTTAAAAAAG ATCTCCAGGT CGCTCCTCCT CATCTCCAGG
ATCGAAAACG AACAGTTCGC CAAATCCGAT AGCCTAAAGC CTGCAGCACT GATCAGAGAA
GTACTCGATG AGATCAGCCA CCGTCTGGAA GAGAAAAACC TGGATATTTC TGTTCAGCTT
AACGACCAGG TCCTGTTAAA GGGTGTCAAC CACGATCTTC TCTTCCAGTT GTTCTATAAC
CTCATCAACA ATGCCATCAA GTACAACGTA CCTGCCGGCA ACATCACCAT CACAGACCAG
GAAATCAGCC AGAACAGCTA TTTAATTACC ATACAGGATA CTGGAATTGG TATTGCCGCC
GAAGAACTGC CCTTTATTTT CGACCGTTTC CGAAAAGCAA ACCTGAAAGA AAACGTAGGT
TATGGCCTCG GACTTTCCAT CGTAAAAAGC ATCGCTGCTT ATCACAACAT AACTATCAAA
GTAAGTTCAA CCTTGCAAAA GGGCAGCACG TTTAAGCTGT ACTTCAAATT AAAATAA
 
Protein sequence
MKLSAKLILF ITSSKLAVVL LFVISLPFLV NGIVSEYISY SLRLQQDKVI RIIHKNGINY 
YLQGDNNYGS YTMLKEEYIA LEPSTANTRI DTIKTAKRLV ERDTLNYRIL MHTFNYEGKN
YLLEIGKTTS SINQYNKPLQ RLALYVLMGL IALSLLFDLL FTRALIRPLG KIIKSKLIDR
KFPFKNHPAP IRTSTYDFKY LDESLILLME QINEAFEKER EFTANASHEL MTPISILQNK
MENLIGDEQL NEEAVVKIAD MMKTLDRLKK ISRSLLLISR IENEQFAKSD SLKPAALIRE
VLDEISHRLE EKNLDISVQL NDQVLLKGVN HDLLFQLFYN LINNAIKYNV PAGNITITDQ
EISQNSYLIT IQDTGIGIAA EELPFIFDRF RKANLKENVG YGLGLSIVKS IAAYHNITIK
VSSTLQKGST FKLYFKLK