| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2449 |
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| Symbol | |
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| ID | 8253556 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2844424 |
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| End bp | 2846712 |
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| Gene Length | 2289 bp |
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| Protein Length | 762 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 644936099 |
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| Product | membrane-bound dehydrogenase domain protein |
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| Protein accession | YP_003092715 |
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| Protein GI | 255532343 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG2010] Cytochrome c, mono- and diheme variants |
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| TIGRFAM ID | [TIGR02604] putative membrane-bound dehydrogenase domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.896022 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAATTAT ATATTTATAC CCTTTTAGCA CTCTTTGTTT TTACGTTGTA CCAATGCCAG
AGTTATAAAA AAACGACTGG AACAGCCAGG CCCGGCCTGA TGCCCGATAC CACCGGATCG
CCGGTGATAC CGGCCGATGC GGCCATTAAG CTGATGAAGC TGGAAAATGG TTTTGAAGTG
AAGCTGGTGG CTGCCGAGCC GCTGGTTACT GCACCTGTGG CCCTTAGCTT TGATGCCAGG
GGCCGGATCT GGGTAGTAGA AATGGTAGGC TATATGCCAG ATGTATATGG CAAAGGGGAG
GACAGGCCAA ATGGTAAGAT CGTGATCCTT GAGGACAAGA ATGGCGATGG TGTGGCAGAT
GAGCGGAAGG TTTTTTTAGA TTCGCTGGTA TTGCCAAGGG CCATCTGTTT GATTGATGGG
GGCATACTGG TGGCAGAATC GCCGAACCTC TGGTACTATG AAATTAAAAA TGATCAACCC
GGAAAGCGGA TACTGGTTGA TGATAAATAT GCAGCGGAGG GGAACGTAGA ACACCAGCCC
AATGGCTTGC TGAGGGCGAT GGACAACTGG ATCTATAATG CCAAGTCGAC CAAACGCTAC
CGCAAATATG GAGATCGCTG GGTGACAGAA GAAACCCATT TCAGGGGACA ATGGGGGATC
AGTCAGGATA ACTATGGCCG GCTCTATTAC AACGACAATT CTACCAACCT GATGAGTGAT
TATTTTAGCC CGGGTTATGG TGCCAGGAAC CCCGACCAGC ATGGTGTGGA GGGCTATTCG
GAAAGAACGG TACGGGACAA CCGGGTTTAT CCGGCAAGGC CTACGCCAGG TGTAAACAGG
GGATATATGC CCGGAACGCT CGATGACAGT CTGCGTTTAA GGAATTTTAC GGCGGCCTGC
GGACCGCTTA TTTACCGTGG GCACCTGTTT GGTGATGCCT ACGATTTTAA TGCCTTTGTG
GCAGAACCAT CGGCCAATTT AATTAAGCGG AACGTGCTGA CTGAGAAGGG TTTTGTGGTG
AGCGGAACAC AGGCCTATCA GGGCAAAGAA TTTCTGGCGA GTATAGACGA ACGTTTCAGA
CCTGTAAGTT TATACAACGG ACTGGATGGG GCCTTATATG TGGTTGACAT GTACAGGGGG
ATTATACAGC ATAAAACCTA TGTAACACCT TATTTAAGAA ACATTATAGA AGAAAGGAAG
CTGGCGCAAC CCCTTGGATG TGGCAGGATC TATAAAATAG TTCCTAAAAA CAGTAAAACA
GCTGCTGTAA AGTTTACTGA GGAGCCCGGG GCACTGGTTG CGATGCTGGG GCATCAAAAC
GGACTGGTGC GGGACATGGC GCAGCAGATC CTGATTGACG GCAGATACAG ATCGGCTATT
CCTTATTTAA GAGCTGCGCT TGGTCATAAG GATCGGCCCT TGCAGCTCAT CCATGCGATG
TGGGTACTGG AAGGTTTGTC GGCCTTGCAG ACGAATGAAG TGCTGGAGTT ATTGAGGTCG
CCGCAATGGC CGGTAAAAAT GCAGGCTTTA AGCGTTCTGC CTGCTGTAAT CAATGGCAGT
TCCTACCGCT ATTTCAGAGA TGAACTGCTG AAGATGGTTG CTGCTGATGA TCAGATGGCC
GCACCTTACC TGGGTTTTGC AGCCAGTTAC ATCCGGCCTT ATGATGCCCC TGCAGCAGAT
GCACTGTTGC TGGCGCTGGT GAAGAAATAT CCCGATAACC CTTACGTTTC TGCTGCGGTG
ATCAGTAACC TGAGCTATAG AGAGGAGCAG TTTGCCGGAG AGATTGCAGG GCTGGTACCC
GATGCCAACC TGGCCATTAA CAAGCAGTTG AAAAAAGTGA TTACGGGTGT CAACAATTCG
CAGAAGAACA GGGACCCTTC TTTATTGATC AGGGATTTCC CTAAAGGGGC AGCTTTGTTT
GCTTCCAGCT GTCAGACCTG TCATGCACCG GACGGCAATG GGATCAAGTC GCTGGCCCCT
CCGTTAAATA AGTCGGAATG GGTTACCGGA AACAAAGAGA AACTCATTTC TATTGTTTTA
TATGGTTTAA CCGGACCGGT TAAGATCAAC GGCTATGTAT ATGAAGCGCC CGAGATTTCG
GCCGATATGC CAGGGATTGC ACATAGCGAT GAAATATCTG ACAACGATGT GGCGCAGGTA
TTGAGTTTTA TCCGTGGTTC ATGGGAAAAT AATGCAGGAA AGGTATCCAT TGATGAAGTA
GCCAAAGTAA GAAAACAGTA TAAGGATAGG GAAAAAGCTT TTACCATAGC CGAGCTTGAA
GGTAAATAG
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| Protein sequence | MKLYIYTLLA LFVFTLYQCQ SYKKTTGTAR PGLMPDTTGS PVIPADAAIK LMKLENGFEV
KLVAAEPLVT APVALSFDAR GRIWVVEMVG YMPDVYGKGE DRPNGKIVIL EDKNGDGVAD
ERKVFLDSLV LPRAICLIDG GILVAESPNL WYYEIKNDQP GKRILVDDKY AAEGNVEHQP
NGLLRAMDNW IYNAKSTKRY RKYGDRWVTE ETHFRGQWGI SQDNYGRLYY NDNSTNLMSD
YFSPGYGARN PDQHGVEGYS ERTVRDNRVY PARPTPGVNR GYMPGTLDDS LRLRNFTAAC
GPLIYRGHLF GDAYDFNAFV AEPSANLIKR NVLTEKGFVV SGTQAYQGKE FLASIDERFR
PVSLYNGLDG ALYVVDMYRG IIQHKTYVTP YLRNIIEERK LAQPLGCGRI YKIVPKNSKT
AAVKFTEEPG ALVAMLGHQN GLVRDMAQQI LIDGRYRSAI PYLRAALGHK DRPLQLIHAM
WVLEGLSALQ TNEVLELLRS PQWPVKMQAL SVLPAVINGS SYRYFRDELL KMVAADDQMA
APYLGFAASY IRPYDAPAAD ALLLALVKKY PDNPYVSAAV ISNLSYREEQ FAGEIAGLVP
DANLAINKQL KKVITGVNNS QKNRDPSLLI RDFPKGAALF ASSCQTCHAP DGNGIKSLAP
PLNKSEWVTG NKEKLISIVL YGLTGPVKIN GYVYEAPEIS ADMPGIAHSD EISDNDVAQV
LSFIRGSWEN NAGKVSIDEV AKVRKQYKDR EKAFTIAELE GK
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