Gene Phep_2445 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2445 
Symbol 
ID8253552 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2839852 
End bp2841705 
Gene Length1854 bp 
Protein Length617 aa 
Translation table11 
GC content44% 
IMG OID644936095 
ProductPeptidase M1 membrane alanine aminopeptidase 
Protein accessionYP_003092711 
Protein GI255532339 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0308] Aminopeptidase N 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.191901 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.796062 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAGTGGT TTATTTTAGC TATCCCTGTT CTGATGATAC TTGCCTGTCA GCCTGAAAAC 
CATAAAACAG CTTTATCAGA AGGGGGAGCT GACCCGCATT CTTATGCCAA TGCCGCGGCT
GCTTTTGTGA AGCACCTTGA CCTGGATATA GCGGTTGATT TTGAGCAGCA GCAAATTAAA
GGAAAGGCCA GCTGGACAAT TGATAACAGT GCGGGGGCGA CTGAGCTTGT TTTTGACGAC
AGTAAACTCA ATATTGAAAA GGTTAGCCTG GGTGCTGATG AAAGCAGCAC TACTTTTAGT
TTCGGACAAG AGAAGGAGTT TATAGGCAAG GCACTGAAAG TGGCCATTTC AGCTGATACC
AGGCAAGTGA ATATTTACTA TACTACGGAT AAGCAGGCAA GTGCCCTGCA ATGGTTAACA
CCCCGGCAAA CTGCAGGTAA AAAGCATCCC TATTTATTTA CCCAGTCGGA AAGCATTGCT
GCACGCAGCT GGATTCCTTG TCAGGACAGT CCCGGTATCC GTTTTACCTA TAATGCAAGG
GTTAGGGTGC CAAAAGAACT TTTGGCATTG ATGAGTGCTG AAAACCCTAC CGTAAAAAAC
GACAGTGGTG TGTACCATTT TAAACAGGTG CATGCTATTC CATCTTATTT GCTGGCATTG
GCGGTGGGTG ACATTACTTT TAAAGCTGTA GATTCCCGTA CGGGTGTGTA TGCTGAGCCT
TCAGTTTTAC AGAAAGCCGT TTGGGAATTT GCTGATATGG GTAAAATGGT TACGGCTGCA
GAAAAATTAT ACGGTCCGTA CCGATGGGGA AGATATGATT TGCTGGTGCT GCCACCCAGT
TTCCCTTTTG GGGGAATGGA GAATCCGAAC CTGACTTTTA TTACACCAAC TATTATTGCC
GGCGACCGCT CACTGGTGAG TATCATCTGT CATGAGCTTG CACATAGCTG GAGTGGAAAC
CTGGTTACCA ATGCAACCTG GAATGATTTC TGGTTAAATG AAGGCTTTAC CAATTATTTT
GAGCGCAGGA TTGATGAAGA ACTGTATGGT AAGCATGAAG CGGACATGCA GGCCGTTTTT
GCCAGACATG CTTTAGATGA TGCGATTTCG GATATGGGGG CAGGCAGTAA GGACACCCAT
TTAAAAACAG ATTATAGCGG CCGGAACCCG GATGAGGGCA CCAATGACAT TGCTTATGAA
AAAGGGTATT TCTTTTTACG GGGCATTGAG GCCGCTGTGG GCCGGGAAAA ATTTGATGCT
TTTTTAAGGA GTTATTTTGA TGCCCATGCC TTTCAATCGC TGACTACCGA GCAGTTTTTA
GACTATTTGA ATAAGAACTT GATTAAGGGC GACGGGGAAT TGGAGCAGAA GATCAATGTT
AAAGCCTGGG TGTATGGTCC TGGAATTCCT GCTAATATTG TTGCGGTTGG CTCAGAAAGA
TTTAAGGTAA TTGATGGTTT ACTGGGCAGA TGGCGAAAAA CCGGACAGCT GACCGGTTTG
CGTAAGGAAA TTGTGTCGAG CAATGAGAAA CGTTATTTTA TCAGTCAGCT TCCCGCAGAT
TTGACCGCTA CGGAAATGTC GGAACTGGAT AAAGAGTTTC ATTTTACGGC TTCCAACAAT
ACGGATGTAC AACTGGGCTG GTATACTTTG GCCATTCGTC ACCATTATAC TGCAGCCGAT
CAGCGGATCA GGTCGTACTT AATAGAAAAC GGACGGATGT GGCACATCAT TCCACTTTAT
AAAGCGTTGT TGAAAACTCC TGAGGGCACA AAAACTGCTA AAGAGATTTA TAAAATTGCC
AGAGGAAATT ATCATCCTAT GACTTATCAG GCTATTGACA AGCTGCTGAA ATAA
 
Protein sequence
MKWFILAIPV LMILACQPEN HKTALSEGGA DPHSYANAAA AFVKHLDLDI AVDFEQQQIK 
GKASWTIDNS AGATELVFDD SKLNIEKVSL GADESSTTFS FGQEKEFIGK ALKVAISADT
RQVNIYYTTD KQASALQWLT PRQTAGKKHP YLFTQSESIA ARSWIPCQDS PGIRFTYNAR
VRVPKELLAL MSAENPTVKN DSGVYHFKQV HAIPSYLLAL AVGDITFKAV DSRTGVYAEP
SVLQKAVWEF ADMGKMVTAA EKLYGPYRWG RYDLLVLPPS FPFGGMENPN LTFITPTIIA
GDRSLVSIIC HELAHSWSGN LVTNATWNDF WLNEGFTNYF ERRIDEELYG KHEADMQAVF
ARHALDDAIS DMGAGSKDTH LKTDYSGRNP DEGTNDIAYE KGYFFLRGIE AAVGREKFDA
FLRSYFDAHA FQSLTTEQFL DYLNKNLIKG DGELEQKINV KAWVYGPGIP ANIVAVGSER
FKVIDGLLGR WRKTGQLTGL RKEIVSSNEK RYFISQLPAD LTATEMSELD KEFHFTASNN
TDVQLGWYTL AIRHHYTAAD QRIRSYLIEN GRMWHIIPLY KALLKTPEGT KTAKEIYKIA
RGNYHPMTYQ AIDKLLK