Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2445 |
Symbol | |
ID | 8253552 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2839852 |
End bp | 2841705 |
Gene Length | 1854 bp |
Protein Length | 617 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 644936095 |
Product | Peptidase M1 membrane alanine aminopeptidase |
Protein accession | YP_003092711 |
Protein GI | 255532339 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0308] Aminopeptidase N |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.191901 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 0.796062 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAGTGGT TTATTTTAGC TATCCCTGTT CTGATGATAC TTGCCTGTCA GCCTGAAAAC CATAAAACAG CTTTATCAGA AGGGGGAGCT GACCCGCATT CTTATGCCAA TGCCGCGGCT GCTTTTGTGA AGCACCTTGA CCTGGATATA GCGGTTGATT TTGAGCAGCA GCAAATTAAA GGAAAGGCCA GCTGGACAAT TGATAACAGT GCGGGGGCGA CTGAGCTTGT TTTTGACGAC AGTAAACTCA ATATTGAAAA GGTTAGCCTG GGTGCTGATG AAAGCAGCAC TACTTTTAGT TTCGGACAAG AGAAGGAGTT TATAGGCAAG GCACTGAAAG TGGCCATTTC AGCTGATACC AGGCAAGTGA ATATTTACTA TACTACGGAT AAGCAGGCAA GTGCCCTGCA ATGGTTAACA CCCCGGCAAA CTGCAGGTAA AAAGCATCCC TATTTATTTA CCCAGTCGGA AAGCATTGCT GCACGCAGCT GGATTCCTTG TCAGGACAGT CCCGGTATCC GTTTTACCTA TAATGCAAGG GTTAGGGTGC CAAAAGAACT TTTGGCATTG ATGAGTGCTG AAAACCCTAC CGTAAAAAAC GACAGTGGTG TGTACCATTT TAAACAGGTG CATGCTATTC CATCTTATTT GCTGGCATTG GCGGTGGGTG ACATTACTTT TAAAGCTGTA GATTCCCGTA CGGGTGTGTA TGCTGAGCCT TCAGTTTTAC AGAAAGCCGT TTGGGAATTT GCTGATATGG GTAAAATGGT TACGGCTGCA GAAAAATTAT ACGGTCCGTA CCGATGGGGA AGATATGATT TGCTGGTGCT GCCACCCAGT TTCCCTTTTG GGGGAATGGA GAATCCGAAC CTGACTTTTA TTACACCAAC TATTATTGCC GGCGACCGCT CACTGGTGAG TATCATCTGT CATGAGCTTG CACATAGCTG GAGTGGAAAC CTGGTTACCA ATGCAACCTG GAATGATTTC TGGTTAAATG AAGGCTTTAC CAATTATTTT GAGCGCAGGA TTGATGAAGA ACTGTATGGT AAGCATGAAG CGGACATGCA GGCCGTTTTT GCCAGACATG CTTTAGATGA TGCGATTTCG GATATGGGGG CAGGCAGTAA GGACACCCAT TTAAAAACAG ATTATAGCGG CCGGAACCCG GATGAGGGCA CCAATGACAT TGCTTATGAA AAAGGGTATT TCTTTTTACG GGGCATTGAG GCCGCTGTGG GCCGGGAAAA ATTTGATGCT TTTTTAAGGA GTTATTTTGA TGCCCATGCC TTTCAATCGC TGACTACCGA GCAGTTTTTA GACTATTTGA ATAAGAACTT GATTAAGGGC GACGGGGAAT TGGAGCAGAA GATCAATGTT AAAGCCTGGG TGTATGGTCC TGGAATTCCT GCTAATATTG TTGCGGTTGG CTCAGAAAGA TTTAAGGTAA TTGATGGTTT ACTGGGCAGA TGGCGAAAAA CCGGACAGCT GACCGGTTTG CGTAAGGAAA TTGTGTCGAG CAATGAGAAA CGTTATTTTA TCAGTCAGCT TCCCGCAGAT TTGACCGCTA CGGAAATGTC GGAACTGGAT AAAGAGTTTC ATTTTACGGC TTCCAACAAT ACGGATGTAC AACTGGGCTG GTATACTTTG GCCATTCGTC ACCATTATAC TGCAGCCGAT CAGCGGATCA GGTCGTACTT AATAGAAAAC GGACGGATGT GGCACATCAT TCCACTTTAT AAAGCGTTGT TGAAAACTCC TGAGGGCACA AAAACTGCTA AAGAGATTTA TAAAATTGCC AGAGGAAATT ATCATCCTAT GACTTATCAG GCTATTGACA AGCTGCTGAA ATAA
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Protein sequence | MKWFILAIPV LMILACQPEN HKTALSEGGA DPHSYANAAA AFVKHLDLDI AVDFEQQQIK GKASWTIDNS AGATELVFDD SKLNIEKVSL GADESSTTFS FGQEKEFIGK ALKVAISADT RQVNIYYTTD KQASALQWLT PRQTAGKKHP YLFTQSESIA ARSWIPCQDS PGIRFTYNAR VRVPKELLAL MSAENPTVKN DSGVYHFKQV HAIPSYLLAL AVGDITFKAV DSRTGVYAEP SVLQKAVWEF ADMGKMVTAA EKLYGPYRWG RYDLLVLPPS FPFGGMENPN LTFITPTIIA GDRSLVSIIC HELAHSWSGN LVTNATWNDF WLNEGFTNYF ERRIDEELYG KHEADMQAVF ARHALDDAIS DMGAGSKDTH LKTDYSGRNP DEGTNDIAYE KGYFFLRGIE AAVGREKFDA FLRSYFDAHA FQSLTTEQFL DYLNKNLIKG DGELEQKINV KAWVYGPGIP ANIVAVGSER FKVIDGLLGR WRKTGQLTGL RKEIVSSNEK RYFISQLPAD LTATEMSELD KEFHFTASNN TDVQLGWYTL AIRHHYTAAD QRIRSYLIEN GRMWHIIPLY KALLKTPEGT KTAKEIYKIA RGNYHPMTYQ AIDKLLK
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