| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2440 |
|---|
| Symbol | |
|---|
| ID | 8253547 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 2835121 |
|---|
| End bp | 2836248 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 644936090 |
|---|
| Product | histidine kinase internal region |
|---|
| Protein accession | YP_003092706 |
|---|
| Protein GI | 255532334 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG3275] Putative regulator of cell autolysis |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 27 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAATTG GTTCGCTTAT CATAATGTTA TTAAAAATGA ATGCAACGCA AGTGGAAGCG
GTTTTTCAAA GTAAAATATT TAAATATGGG ATCAGGGCGG TTGTCCTGTT TATATTCAGT
ATCATCTTTA AATCTTTTGA CCTTACGTTT CCTAAAAATT TTAACCCATT TCTTTTCAGG
GCACAGGCTT TCAGTTTAAT GTTTGTGCTG GTGGGCCTGG TGGCATGGGA AGGGGCAGTG
AGGGTCTCTA AGTATGTGGA ACAACATGTT TTTAACCATA ACCTTTCCTA TAAGCTACTG
TTTTTGTGTT TTAGCCTTAT CGTTTATGGT TTGTTATCCA GCTTTTTGTT TGGCTTTTGT
TATTCGGTAT TTGATATTTT TCTTTACCAT AAATACGAGG CCTGGAATAG TTTTTCGAGT
TTGAGCTATG ACCTTTATTT TGGTTCATTT ATGTTTTACC TGCTGATCCT GGCTTATAGC
GGCATCGTTT TCTATTACAA AAACTGGAAA GAAAGCCAGC TGAATGCGGA GCGGCTGATG
CGGGAGAACA TACAGGCGAA GTATGATGTG CTGAAGAGCC AGATTGATCC ACATTTCTTT
TTTAATTCCT TAAGTGTACT GACCAACCTG GTGTATAAGA GTGCCGACCT GTCGGCCGAA
TACATTACAC AACTGGCGAA GAGCTACAGG TACATTCTGG ACAAAAAATT TGAGAACCTG
GTATCTATCC GTACGGAGCT TGAGTTTTTA GCATCCTATT CCTTTCTGAT CAGGATAAGG
CACCAGAGCA GCATTGTTTT TAATATTGAC ATAGACGAGG AGGTGAGGAA CAGGGGCATG
GTGCCACCGG CTACGCTGCA GATGCTGGTG GAGAATGCGG TAAAGCATAA CCGTTTTTCG
GCAAATGACC CCTTGCATAT CAATATAAAA GATGTTGGAG ATTCATTAAT TGTTTCGAAC
GACCTGAGAA AGCGTACAGG GCTTCAGCAT TCGATAGGTG TTGGGCTGGA CAACATCAGC
AAAAGGTATG AACTGACGAG TGATAAAAGG ATAGAAATTA CCGAAACCGA AGATGAATTT
ATTGTAAAAG TCCCTATAAT TAATAATTAT GAAGATCATC ATATTTGA
|
|---|
| Protein sequence | MLIGSLIIML LKMNATQVEA VFQSKIFKYG IRAVVLFIFS IIFKSFDLTF PKNFNPFLFR
AQAFSLMFVL VGLVAWEGAV RVSKYVEQHV FNHNLSYKLL FLCFSLIVYG LLSSFLFGFC
YSVFDIFLYH KYEAWNSFSS LSYDLYFGSF MFYLLILAYS GIVFYYKNWK ESQLNAERLM
RENIQAKYDV LKSQIDPHFF FNSLSVLTNL VYKSADLSAE YITQLAKSYR YILDKKFENL
VSIRTELEFL ASYSFLIRIR HQSSIVFNID IDEEVRNRGM VPPATLQMLV ENAVKHNRFS
ANDPLHINIK DVGDSLIVSN DLRKRTGLQH SIGVGLDNIS KRYELTSDKR IEITETEDEF
IVKVPIINNY EDHHI
|
|---|
| |