Gene Phep_2438 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2438 
Symbol 
ID8253545 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2831679 
End bp2834267 
Gene Length2589 bp 
Protein Length862 aa 
Translation table11 
GC content43% 
IMG OID644936088 
Productprotein of unknown function DUF470 
Protein accessionYP_003092704 
Protein GI255532332 
COG category[S] Function unknown 
COG ID[COG2898] Uncharacterized conserved protein 
TIGRFAM ID[TIGR00374] conserved hypothetical protein 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.298386 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACAAAG CCAGGTTATA CCTCTCGAGA TTGGTTTACA ACAAGTTTTT TTGGCAGTTG 
TTTCTGGCAA TTTTTATGAT TGCTATGGCG ATCTTTTTTA TCCGGCAGGA ACACATTGAG
GTGGTAAAGA TCAAGGCGGA GCTGGAACGC AGCCAACCTG TCTACATTGT TTTGGGATTG
GTGCTGACTG TAGTTTATAT CCTTGCTCAG GGACTGATGT ATGTGTACAG TTTTAAAGCT
TTAAACAAAT CGATTTCGCT GGCGCTGGCC ATTAAATTGT TTCTTAAAAG AAACCTGGTG
AGTGTTTTTT TACCGGCGGG TGGTTTTTCA TCACTGGTGT TTTTTACGAA AGAGATAGAG
GAGAAGGGGG TAGGCAAATC ACAGATTCAT CTGGCCTCTA CTTTATTTGG TTTTTGCAGT
ATCCTTTCGG TAGTTATAGT AGCGGTCCCG GTTTTGGCCA TCGCCCTGTT GTTTACCAGG
TTAGGGAATG CCGAATTGCT GGGCTTTGTT TTTCTGTTGT TGCTTACGGC AGGTTTTATT
TTACTTGTTT ATTCTATTTC TGTAAAAGGC CGTGCCTATC GCTGGCTTTC CAGGATGCGG
CCCTCGCTGT CTACCGTTCT GGATGACATG ATCAATGAAA AGATCAACAG AAAACAATTC
TGGATAACTT TACTGATCTC TGTTGGCATA GAGGTGATTG GTATTGTACA CCTGTACATT
TCTATGCTGG CCCTTGGCTT TGATGCCAGC TGGCCGGCAG CCATTATAGG TTATATCGTG
ATGGTAATCC TGCTGATCGC ATCGCCTTTT TTAAGGGGAC TGGGAGCAAT AGAATTGTCG
CTGACCTTTG TTTTACAGCA GTTTGGCTTT CCGGTGCTTG CTGCTGCAAC CATTACCCTG
CTGTTCAGGT TTTTTGAATT CTGGATTCCG CTGCTGGCGG GCATTATAAG TTTTATCACC
AAAAAGGATA ACCTCATCCT GCGGATACTA CCGGCATGCA TTATCCTGGT GCTGGGCATT
GTAAACATCA TTTCGGCAAT TACACCAGCT ATACCTACCC GTTTAAGGAT GGTAAAAGAC
CTGCTGCCAG AAGATCTGAT CATTACCAGT AATTCACTGG TGCTGGTTTT TGGCTTGATA
CTGGTTATCA TCAGCATATT TTTGTTACAG GGTTCCAGAC GAGCCTGGTA TACGGCTTTG
TTTCTGACTG TTTTTTCAGT TATCGGGCAC CTGTTTAAGG CAGCGGATTA CGAGGAAGCC
TTACTGGCCT TTATTGCTGC TTCGGCTTTA TGGTATACCA GAAGCTCCTA TAAGCTTAAG
CCCAATGCCA AACTGGTTTC CATCAATTAC CTGGTGTTGC TGTACGCAGT ACTTGCCCTG
CTTGCTTATG GGGTACTGGG CTTTTATTTC ATAGACAAAA GACATTTTGG GATTGACTTT
CATTTTATGC AGGCGCTGAA AGCAGTTTTA AAGTTGTTTT TTCTGATCGA TTATCATGGA
ATGACACCTT TGACCAGGTT TGGTGAGCGC TTTCAGGATT CCATCTATAT CTCGGGGGCT
GCAGTGATCC TTTTTGTAGT TTTCAGTTTA CTGAGGCCTT ATTTTTCCAA GCCCTATAAT
TCTGAGCAGG ATTTTGACCT GGCGAGGCAG TTGCTGCAGC AATACGGTTC TTCTGCACTG
GATTATTTTA AAGTATACCC CGATAAATTT TTATTCTTTA AGCCCGACAA AACGGCTTTT
ATCAGCTTTA AGGTGACACG GCATTTTGCC ATTGTGCTGG AAGATCCCGT TGCAGGTACT
GAGACGGCGC AACAGGAAAT GATCGGGCTG TTTGAAGATT TCTGTGCCCA GAATGGTTTT
ATAAGTGCCT ATTACCGCGT GCCTGAAAAA TCTTTACAGC TGTATACTGC TGCAGGATAT
AAATTTATCC CTATAGGAGA AGAAGCTGTT CTGGACTTGA CTGGTTTTAC ACTTGATGGT
GGCAAGATGA AAACCACCAG GAGTGCCATC AGCAGGCTTA CTGCCGAAGG CTATTGTTTA
AAAGTTTACC AGGAACCGAT TAAGGAGGGC CTGTTGCAAA AGCTTGAAAA GGTATCGGAC
AACTGGCTGG CGGAGCTGCA CCAAAAGGAA GTTGCTTTTA CCCAGGGTGT TTTTGATACC
AGTATTTTAA AAACGCAGAC GATCATTACC GTAGAGGATG AAGAAGAGAA GGTTTATGCA
TTTTTGAACC TGGTACCGGA TTATGCGCCG GGTGAGGCTA CCTACGATCT GATCAGGAAG
GTCAGCGATG CACCCAACGG CGTGCTGGAT ATGCTGCTGG CCAAAACTTT TATTTATTTA
AAAGAGCAGG GTTATACCAG TGTCAATATG GGACTGGCAC CTTTATCGGG AATGGAAGAG
GTAAACATTA CCCAGAAAAC AATTAAGTAT GCCTACGAGA ATTTTAAAGT ATTCGGGCAG
TTTAAGGGTT TAAGAAAATA CAAGGAGAAG TTTTATCCCA ACTGGGAAAA GAAATATTTG
ATTTACAGTC ATAATTACCA TTTGTTGCAG GTGCCATCGG CCCTGAGACG TGTTTCTGAA
GGCAGTTAA
 
Protein sequence
MNKARLYLSR LVYNKFFWQL FLAIFMIAMA IFFIRQEHIE VVKIKAELER SQPVYIVLGL 
VLTVVYILAQ GLMYVYSFKA LNKSISLALA IKLFLKRNLV SVFLPAGGFS SLVFFTKEIE
EKGVGKSQIH LASTLFGFCS ILSVVIVAVP VLAIALLFTR LGNAELLGFV FLLLLTAGFI
LLVYSISVKG RAYRWLSRMR PSLSTVLDDM INEKINRKQF WITLLISVGI EVIGIVHLYI
SMLALGFDAS WPAAIIGYIV MVILLIASPF LRGLGAIELS LTFVLQQFGF PVLAAATITL
LFRFFEFWIP LLAGIISFIT KKDNLILRIL PACIILVLGI VNIISAITPA IPTRLRMVKD
LLPEDLIITS NSLVLVFGLI LVIISIFLLQ GSRRAWYTAL FLTVFSVIGH LFKAADYEEA
LLAFIAASAL WYTRSSYKLK PNAKLVSINY LVLLYAVLAL LAYGVLGFYF IDKRHFGIDF
HFMQALKAVL KLFFLIDYHG MTPLTRFGER FQDSIYISGA AVILFVVFSL LRPYFSKPYN
SEQDFDLARQ LLQQYGSSAL DYFKVYPDKF LFFKPDKTAF ISFKVTRHFA IVLEDPVAGT
ETAQQEMIGL FEDFCAQNGF ISAYYRVPEK SLQLYTAAGY KFIPIGEEAV LDLTGFTLDG
GKMKTTRSAI SRLTAEGYCL KVYQEPIKEG LLQKLEKVSD NWLAELHQKE VAFTQGVFDT
SILKTQTIIT VEDEEEKVYA FLNLVPDYAP GEATYDLIRK VSDAPNGVLD MLLAKTFIYL
KEQGYTSVNM GLAPLSGMEE VNITQKTIKY AYENFKVFGQ FKGLRKYKEK FYPNWEKKYL
IYSHNYHLLQ VPSALRRVSE GS