Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2430 |
Symbol | |
ID | 8253537 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2825225 |
End bp | 2826706 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 644936080 |
Product | putative L-arabinose isomerase protein |
Protein accession | YP_003092696 |
Protein GI | 255532324 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2160] L-arabinose isomerase |
TIGRFAM ID | |
| 

|
Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0201601 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACTGACC CTATCGCATC CGTTTCAGCA AAGCAATCAT TTTTACCGAA CAATTCAAAA TCGACACTAA AAATAGGTTT GTTTGGTATT GGATTAGACA CTTACTGGCC ACAGTTTGAA GGCTTAAAAA AACGGCTGGA AGGCTATCTG GCTATAGTTG AGCAGAAACT CGGGGCTATC CATCCTGCCG TTTTAAATGC AGGTTTGGTA GACAGCCCCG ATAAGGCTTT TGCTGCCGGC AGGTTGTTTA AAACAGAAGA TGTAGATGTG ATCTTTTTAC ATGTGACCAC TTATGCCTTA TCGTCGACGG TATTACCGGT GGTTCAGCGC GCCAAGGTAC CCGTTATTAT ACTTAACCTG AGTCCGGAAG CCGCTATAGA TTATACCGCC TTTAATGCCA TGACAGACAG GACCAAGATG ACGGGTGAAT GGCTGTCTTA CTGCTCTGCC TGTCCGGTTC CTGAAATTGC CAATGTATTT AACCGTACAG GCATAAAATT TCATCAGATT ACCGGGATGC TGCAGCACGA TCCGGAATGC TGGAACGAGA TTACAGAATG GGTAGAAGCG GCAAAGGTGG CCAACATGAT GTTTTATAAC CGGATGGGCT GTATGGGGCA TTATTATAGT GGTATGCTGG ACATTTATTC TGACCTGACC CAGCAGTATG CACATTTTGG GGGCCATATA GAATTGCTTG AAGTAGAGGA ACTGGCCAGT TTGCGGAAAG CCGTAACGCC AGCGGAAATG AACGAAAGGC TGCAGTTGTT TTACGAAACC TTTGACGTGC AAAAGGATTG CGCTAAAGAA GAACTGGAAA AAGCGGCGGT TACCTCGGTG GCCCTGGATA GATTGGCGGA CAAACATCAG CTGGGTTCGA TGGCTTATTA TTATAAAGGC ACGGGGAATA TTGAGAATGA AGAAGCCATC AGTTCAATCA TTCTGGGCAA TTCACTTTTG ACTGCGCGGG GAATTCCTGT GGCAGGCGAA TATGAAATAA AAAATGCGCA GGCCATGAAA ATTATGGATT GTTTTGGTGC GGGAGGCTCA TTTACAGAAT ACTATGCAAT GGACTTTAAC GACGACGTAG TGCTGATGGG ACATGATGGA CCCGGACATA TTGCCATTGC AGAAGGTAAA ACAAAAGTTC GTCCTTTAGG TGTATACCAT GGCAAAGTTG GCAAGGGGGT ATCTGTGGAG ATGTCGGTAA AAAACGGGCC TGTAACTTTA TTGTCAGTAG TAGAACAGAA AGGGGGCAGC CTGATGCTGC TGGTAGCCGA GGCTGAAGCA GTACCGGGTC CGATATTGCA GATTGGCAAT ACCAACAGCA GGTATAAATT CCCTGTTGGT GCCAGAAATT TTGTAAACAG CTGGAACAGT TACGGCCCTG CACATCACTG TGCAATTGGT TTAGGACACA TCAGCTCAAA AATTGAAAAG CTGGGCCAGT TATTAAACAT GGATGTGGTT AAGGTGTGTT AA
|
Protein sequence | MTDPIASVSA KQSFLPNNSK STLKIGLFGI GLDTYWPQFE GLKKRLEGYL AIVEQKLGAI HPAVLNAGLV DSPDKAFAAG RLFKTEDVDV IFLHVTTYAL SSTVLPVVQR AKVPVIILNL SPEAAIDYTA FNAMTDRTKM TGEWLSYCSA CPVPEIANVF NRTGIKFHQI TGMLQHDPEC WNEITEWVEA AKVANMMFYN RMGCMGHYYS GMLDIYSDLT QQYAHFGGHI ELLEVEELAS LRKAVTPAEM NERLQLFYET FDVQKDCAKE ELEKAAVTSV ALDRLADKHQ LGSMAYYYKG TGNIENEEAI SSIILGNSLL TARGIPVAGE YEIKNAQAMK IMDCFGAGGS FTEYYAMDFN DDVVLMGHDG PGHIAIAEGK TKVRPLGVYH GKVGKGVSVE MSVKNGPVTL LSVVEQKGGS LMLLVAEAEA VPGPILQIGN TNSRYKFPVG ARNFVNSWNS YGPAHHCAIG LGHISSKIEK LGQLLNMDVV KVC
|
| |