Gene Phep_2423 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2423 
Symbol 
ID8253530 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2818864 
End bp2820162 
Gene Length1299 bp 
Protein Length432 aa 
Translation table11 
GC content44% 
IMG OID644936073 
Producthypothetical protein 
Protein accessionYP_003092689 
Protein GI255532317 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGATA GCAATATATC TTTTAAAAAC AAATGGATCC CCATACTTGC CCTGCTCGTT 
GGTATGCCCT GGGGTTACGC ACAGGCGCAA ACCATTGATT CATTAAGGAC TGACCCTATA
AAAAGGGACA GCAGCTATAC CCAATACGAT ATTGGTGATC TTTTTAACAG TATTTTTCAT
CCTAAGCGGA AAAGTACTAA CCCGGCAAAA AAATCAGCTG TAACCATCAT TCCTAATTTT
GCATATAACC CAAGTATAGG GGCACAGATC GGCATAAAGG CAGTTGCGGG TAAAATATTG
GGAAAAGACC CGCATACACT CATGTCCATT GCCGCAACTT CAGCATCTAT AACCACTAAA
GGCATCATTT ACTTTTACCT TAACCACAAT GTATATACAC CTGGTAATAA ATGGAACCTC
CAGGGAAGCC TGGTTGCCGC AAAAACCGTA TTGCCAGATT TTGGATTGGG CATAGGTAAA
GCTGCCACAG GTAGCGAAGC CGACATGATC CTCAGTAATC CCGGCCGAAA ACCCTATGTA
CTTCACGCAG AATATTACAA TTTCAGGGAA AAGATATACA AGCAGGTGCA GCCAAACTTA
TTTCTGGGTG CCGGGGTATC CTTCGAGATC AGAAGGAAAA TTGAAGATCG CGCAAATACC
AGCAATGCAC TTACGCCATA TAACATCTAT AGCGACAAAT ACGGCTTTAA CCGTGACCAT
TATCAATCTA ATGGCTTATT GTTTAACCTG CAGTATACTA CGCGCGACAA CCAGAACCGT
GCTTATAAAG GCATTTATGT TGATGCCGGC ATCCGCCTTA ACCAAACCTG GATGGGCAGT
TCTAAAAGTG CTATGCAGAT TACCACCGAT TTCAGAAAAT ACTGGAGTCT CTCCAGCAGC
AATCCTGAAC ATGTTATCGC CTTTTGGAAC TGGGGCTCCT ACCTGATCAA TGGGGCCCTT
CCCTATCTGG AACTGCCAGG TACCGGAAGG GATACCTACT TCCGCAGTGG AAGGGGCTAT
ACAGTTACCT ATTTTAAAGG CCCGCAATAT TTTTATTCAG AGCTGGAATA CCGTTTTCCG
ATCACAAGGA ATAAATTTAT AAGTGGTGTT GCTTTTGGCA ATATACAAAC GGCCAATGAC
GACCTCGGTA CAGCACTGTT TCAGGAATGG CAGCCAGGTG GCGGTGCAGG CTTACGTGTA
TTGTTTAACA AAGCCACACG AACTAACCTC TGCCTGGATT ATGCCTTTGG AAAATATGGT
TCAAAGGGGT TCTTCCTGGG CCTCACTGAA GCCTTTTAA
 
Protein sequence
MPDSNISFKN KWIPILALLV GMPWGYAQAQ TIDSLRTDPI KRDSSYTQYD IGDLFNSIFH 
PKRKSTNPAK KSAVTIIPNF AYNPSIGAQI GIKAVAGKIL GKDPHTLMSI AATSASITTK
GIIYFYLNHN VYTPGNKWNL QGSLVAAKTV LPDFGLGIGK AATGSEADMI LSNPGRKPYV
LHAEYYNFRE KIYKQVQPNL FLGAGVSFEI RRKIEDRANT SNALTPYNIY SDKYGFNRDH
YQSNGLLFNL QYTTRDNQNR AYKGIYVDAG IRLNQTWMGS SKSAMQITTD FRKYWSLSSS
NPEHVIAFWN WGSYLINGAL PYLELPGTGR DTYFRSGRGY TVTYFKGPQY FYSELEYRFP
ITRNKFISGV AFGNIQTAND DLGTALFQEW QPGGGAGLRV LFNKATRTNL CLDYAFGKYG
SKGFFLGLTE AF