| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2416 |
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| Symbol | |
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| ID | 8253523 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2810187 |
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| End bp | 2810855 |
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| Gene Length | 669 bp |
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| Protein Length | 222 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644936066 |
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| Product | TonB family protein |
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| Protein accession | YP_003092682 |
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| Protein GI | 255532310 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
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| TIGRFAM ID | [TIGR01352] TonB family C-terminal domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.738112 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTTTAC GTACCACTAT TTTTGTACTT TGCCTGTTGC TTTCGGGCAT TGTAACCTAC
GCCCAAAAAA CGGATACCAC TTATTATGAT AAAGACTGGG AGCCTTCTAC AAAGGCATTG
GGTTCTTATT TCCGCATTAC CAAAACAATA GAAGAAGGCA AAAGGTATGA GGTTACCGAC
TACTTTAAAT CCGGGAAAAT CCAGATGACT GGTGCTTATA CCTCACTTTC ACCAGAAGTA
AAGGACGGGG AGTTCATCTG GTACGATGAG CAAGGAAAGA AAGAAAAAGA AGCGGTATAT
GTACTGGGAA AGCTTAGGTT TAAAAAAGAC TACAGAGCAG TTCCACCACC AAACGGGGCC
ACTGAGTTCG TTTCTTTAGA AAAACAGCCT GTATATCCGG GAGGGATCAA TAAATTGTAT
AAATACATTG GGGCCAATTT TGTGTACCCC AAAAGCATGT TGAAGTTAAG GCCCAAAGGG
ACCATTAAGG TCAGCTTTCT TATTGAAAAA GACGGCAGTG TATCAGAAGT ATATGTTAAA
GAGTCGGTAC ACCCCTTACT GGATGCTGAA GCCATCCGGG TTATTGAGGG GATGGAAAAA
TGGGAGCCCG GGATACAAAG TGGAAAACCT GTAAGGGTAG CTTATAACAT CCCTATAAAA
ATGAATTGA
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| Protein sequence | MILRTTIFVL CLLLSGIVTY AQKTDTTYYD KDWEPSTKAL GSYFRITKTI EEGKRYEVTD
YFKSGKIQMT GAYTSLSPEV KDGEFIWYDE QGKKEKEAVY VLGKLRFKKD YRAVPPPNGA
TEFVSLEKQP VYPGGINKLY KYIGANFVYP KSMLKLRPKG TIKVSFLIEK DGSVSEVYVK
ESVHPLLDAE AIRVIEGMEK WEPGIQSGKP VRVAYNIPIK MN
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