Gene Phep_2388 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2388 
Symbol 
ID8253495 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2785698 
End bp2786018 
Gene Length321 bp 
Protein Length106 aa 
Translation table11 
GC content39% 
IMG OID644936038 
Productregulatory protein ArsR 
Protein accessionYP_003092654 
Protein GI255532282 
COG category[K] Transcription 
COG ID[COG0640] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.923334 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones22 
Fosmid unclonability p-value0.262828 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACATA CAAGAGATAT CTTTCAGGCA ATAGCAGATC CAACCCGAAG ACAAATTATA 
GGCATGCTTG CGCAGAAATC ACTCAATGTG AATGCTATTG CCAAGGAGTT TGCCATAACG
AGGCAAGCAG TTTCATTGCA TGTACAACTT CTAAACGATT GTGGTCTCAT TACCATCAGG
CAACAAGGTA GGGAACGATA TTGTGAGGCA AAACTAGAAA AACTAAAGGA AGTGACAGAT
TGGGTAGACC AGTACCGGAA ATATTGGGAC AATCAATTTG ATTCATTGGA AAGCTATCTG
GCAAAAATTC AAAAAAAATA G
 
Protein sequence
MTHTRDIFQA IADPTRRQII GMLAQKSLNV NAIAKEFAIT RQAVSLHVQL LNDCGLITIR 
QQGRERYCEA KLEKLKEVTD WVDQYRKYWD NQFDSLESYL AKIQKK