Gene Phep_2387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2387 
Symbol 
ID8253494 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2785199 
End bp2785687 
Gene Length489 bp 
Protein Length162 aa 
Translation table11 
GC content36% 
IMG OID644936037 
ProductActivator of Hsp90 ATPase 1 family protein 
Protein accessionYP_003092653 
Protein GI255532281 
COG category[S] Function unknown 
COG ID[COG3832] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.378014 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAAAGT ACAATACATT CAAACAAGAA GATAATGTTC TGATACATAC AAGAATCCTG 
GATGCACCAA GAGATTTAGT ATGGGAAGTA TGGACTAACC CTGCACATAT CAGGGAATGG
TGGGGGCCAA ACGGTTTTTC GCTAACTACC AGATCAATGA CGGTAGAACC AGGCCAGATC
TGGGATTTTA TTATGCACGG CATGGGAAGG GATTGGGATA ATAAAATAGA ATATGTAGAA
GTAAATAAGC CTTACTTACT GTCCTATAAA CATTCTGGTG AAAAAAGCGA AGATTATAAC
TTTATGGTTT CAGTTTCGTT TGAAGAAGTT GAAGGAAAAA CCTTATTGAC CATGAAGTCG
GTATTTAAAT CAAAAGCAAT TATTGATGAG TTAAACAGAA AGGTAAATGC TATAGAAGGA
GGCAAACAGA CTTTAAACAG ACTCGAAAAC TATCTTAAAA TAACTATTCA CCAAAAAACA
GAATCATGA
 
Protein sequence
MEKYNTFKQE DNVLIHTRIL DAPRDLVWEV WTNPAHIREW WGPNGFSLTT RSMTVEPGQI 
WDFIMHGMGR DWDNKIEYVE VNKPYLLSYK HSGEKSEDYN FMVSVSFEEV EGKTLLTMKS
VFKSKAIIDE LNRKVNAIEG GKQTLNRLEN YLKITIHQKT ES