| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2379 |
|---|
| Symbol | |
|---|
| ID | 8253486 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 2777205 |
|---|
| End bp | 2778983 |
|---|
| Gene Length | 1779 bp |
|---|
| Protein Length | 592 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 644936029 |
|---|
| Product | Cytochrome-c peroxidase |
|---|
| Protein accession | YP_003092645 |
|---|
| Protein GI | 255532273 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1858] Cytochrome c peroxidase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.574362 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.305226 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCGTTCAA TTTCTAAAAT TGTTATCCTT GGTTTTTCAG CAACTGTAGT TGTAACGCTA
CTATCCCTTC GGCAACCGGA CGGGCCAGCA GTACAGGTTA AACAACAATT AATTCGTCAG
GCAGACAGTT TATTGCTTGC TGTCAACTTG TTGCGGTCAG TAAAAATGGA TGTTGCACAA
AGCCAATTGT TACAGCAGCG TTTCCGCGAG GTAAGGCTTG CCTATAAACA GCTAGAATGG
GCCACGGAAT ACTTTGATCC GCTAACGGCC CGGCAAGTGA ACGGCCCGCC GGTACCAGAA
ACCGAACTGA ATGGACTGGT AATACAGCCC GATGGATTAC AACTTATTGA ACAGTATCTT
TTTCCGGGAT TTGTATCTGA TAAACAACAA GAATTTAGTG GCTTACTGGG GCGTTTGGCA
ATCAATGCAA CGGAGTTCCG TGAGTTTTTT AGGAGAGCAG ACCTGCAGGA CTGGCAGATC
CATGATGCGG TAAAGCAGGA GGTTTTTCGA ATAGAGATAC TTGGACTTAA TGACTTTGAT
GACCCGCTAT CCAAAAGGTG TTTTGCCGAA TCGGCGGCAG CACTGCAAAG TCTGAAGGGT
GTTATTGCTC ACTATAAGGC TGTGCCTGAA TTTGATCCGG CTATCGGTTA TCTTCAGCAT
CCCGAAACAT TTGACCGCTT TGATCGAGCC GCCTTTATCA TCCGTTACGC CAACCCGCTC
ACCAGGTCGC TCAAGTTATT AAAGGATCAA TTAAAATTGC CGGATGTTCG CTACAACCGC
TTGCTTAATC AGGATGCCGC AACACTATTT GAAGCAGATG CCTTTAACCG TAATGCTTAT
ACTGCCGAAC CGGGGGATTC TGTTACCGCA GAAAAGACTG TTTTAGGCAA AAAGCTATTC
TTCGATCCGG TACTTTCTGG CAGTGGCAAG CGCAGCTGTG CTTCCTGCCA TCAGCCTAAC
CTTGATTTTA CGGATGGCCT GATCAAAAAC CTTGATATTA CCGGCAAAAG GATGATTATG
CGCAATACCC CGACACTGAT CAATGCGGCT TTACAACCTG CACAATTTTA TGACCTGCGG
GTTCCTTCGC TGGAAGACCA GGCCAGGGAT GTGTTAAATA ACCCAGACGA AATGCATGGT
GACATGCAGG TAGCAATTGG TAAGCTCTGG GCCGATACGA ACTACCGAAA GCTGTTCAGT
AGTGCTTATC CCCGACAGGG GCGTATGGCG ATTGATACCT TTGAGGTAAT GAATGCCCTG
GCGGGATACG TGCGTAGCCT GACTGCACTG AACAGTCGTT TTGACGCTTA TATGCAGGGC
GATGAGCGTG CCATGAAAGA GACAGCGTTG GCTGGTTTTA ACCTGTTTAT GGGCAAAGCC
CGCTGTGGAA CCTGCCATTT TCTGCCGCTG TTTAACGGTA CGCTGCCACC ACGTTATATG
CAAATGGAAG CGGAAGTGAT TGGGGTGCCC CAAAAAATAG ATCGTAAATA TATCGATCCG
GATTTGGGCC TCTACCGCAT TCAATCCGGA GATTTTAATC GCCATGCCTT TAAAATTACC
ACGGTTCGCA ATACCACCCG TACTGCACCA TATATGCACA ATGGTGTATT TCGGACACTT
GAAGAAGTGA TCGATTTTTA TGATAAGGGT GGTGGTAGGG GTGCGGGCAT TGAAATTGCC
AACCAGACAC TGGATGAGAC ACCGCTGCAC CTGAACGAAG AAGAGAAAAC CGAAATAATC
GATTTTATCA AGAGCCTGGA TAGCATTAGC ACTTTATAG
|
|---|
| Protein sequence | MRSISKIVIL GFSATVVVTL LSLRQPDGPA VQVKQQLIRQ ADSLLLAVNL LRSVKMDVAQ
SQLLQQRFRE VRLAYKQLEW ATEYFDPLTA RQVNGPPVPE TELNGLVIQP DGLQLIEQYL
FPGFVSDKQQ EFSGLLGRLA INATEFREFF RRADLQDWQI HDAVKQEVFR IEILGLNDFD
DPLSKRCFAE SAAALQSLKG VIAHYKAVPE FDPAIGYLQH PETFDRFDRA AFIIRYANPL
TRSLKLLKDQ LKLPDVRYNR LLNQDAATLF EADAFNRNAY TAEPGDSVTA EKTVLGKKLF
FDPVLSGSGK RSCASCHQPN LDFTDGLIKN LDITGKRMIM RNTPTLINAA LQPAQFYDLR
VPSLEDQARD VLNNPDEMHG DMQVAIGKLW ADTNYRKLFS SAYPRQGRMA IDTFEVMNAL
AGYVRSLTAL NSRFDAYMQG DERAMKETAL AGFNLFMGKA RCGTCHFLPL FNGTLPPRYM
QMEAEVIGVP QKIDRKYIDP DLGLYRIQSG DFNRHAFKIT TVRNTTRTAP YMHNGVFRTL
EEVIDFYDKG GGRGAGIEIA NQTLDETPLH LNEEEKTEII DFIKSLDSIS TL
|
|---|
| |