Gene Phep_2375 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2375 
Symbol 
ID8253482 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2772469 
End bp2773707 
Gene Length1239 bp 
Protein Length412 aa 
Translation table11 
GC content41% 
IMG OID644936025 
ProductFecR protein 
Protein accessionYP_003092641 
Protein GI255532269 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0596034 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.112561 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAAATTAT ACGCTCATCA ATTAGTTGCA GAGGCACTCA GCCTATTACA TGACAACAAT 
ACAGATTGCT TTCCTGTATA TGATCAGGAA GTACCCATAG GTAAAATTAC CTATGCTGAA
CTGATGTTCT TTGTTGGCCA TCATGAGATC AAACTTCAAT TTGATCTAAG AACTACTTTG
TCTGCTATCA AAGGGATGCA AATAGCGCAA CATCAAATGG CACAAAAAAA AGCCAGAATC
TCGAAATGGG TTGCCAGGCT AGGCACAGCT GTAGTTTTGA TGTTTGTACT GTTTGGTTTT
ACCTGGTTGT TTTCTGACCC GGTTGATTTC AGGTCTGGCA ACCATAATGA TAAATCGGGT
ACGGATGCTA AAAACATTAT CTTAGCTTTA TCAAACGGCA TGCATCTGCC GCTTGATCCC
TATAAAGAAG GAATTGTTGT TGATCACTCA AAGTTGAGCT ATAATGACGG GACTGTTGTT
TTCTCGCGCA ATGACAACAG AACTACTAAC CTGAGTATCA GCACTGCCAG AAAAGGCATT
TACCAGATAA CTCTTCCCGA CGGAACCCGG GTTTGGCTCA ATGCTTCCAG CAAACTTAGC
TTTCCTTCAA CTTTTACCGG AAGTGCCAAA CGCATTGTCC GTTTAAGTGG TGAAGCATAT
TTTGAAGTTG CAAAGGTTTG GACAAAACCA AATCACAGAA TACCATTCAT TGTGTTAAGT
GATAATCAGG AAATAGAGGT TCTGGGCACG CATTTTAATG TACGTGCTTA TCCAAAAACA
AGTATAAAAA CAACTTTGGT GGAAGGCACT GTCCGCATTA CACCTTTAAC TGATAACCAG
CCAGTTAGTG CCGATCCTGC TATGACAGAC CCCATGATGG CATCTGTTAA CAACCAGTCC
AAAAGATTGC TGCAGTCCCA GGCAGTGGTC CTGAAACCTG ACCAGCAAGC CACTTTAACG
GCTCAGCAAT TAACTGTCAG CGCTATTGAT GCAGAAGGTA CCATTGCCTG GACAAAAAAG
GATTTTACTT TCAGAAATAT GCCATTGGAA GCCATTATGA ATGTAGTTGC CAGTTGGTAT
GATGTAGACA TCATCTATCA GCAAAAACCC AACATTGTGC TTTTGGGTGG TTCACTACAA
CGTTCTGATC AATTGGATGA GCTGCTTGCT GCACTTACAT TGGCTTCAAA TATGCACTTT
AAGGTACATG GCAGACAGGT TACAGTAATA AAACAATAA
 
Protein sequence
MKLYAHQLVA EALSLLHDNN TDCFPVYDQE VPIGKITYAE LMFFVGHHEI KLQFDLRTTL 
SAIKGMQIAQ HQMAQKKARI SKWVARLGTA VVLMFVLFGF TWLFSDPVDF RSGNHNDKSG
TDAKNIILAL SNGMHLPLDP YKEGIVVDHS KLSYNDGTVV FSRNDNRTTN LSISTARKGI
YQITLPDGTR VWLNASSKLS FPSTFTGSAK RIVRLSGEAY FEVAKVWTKP NHRIPFIVLS
DNQEIEVLGT HFNVRAYPKT SIKTTLVEGT VRITPLTDNQ PVSADPAMTD PMMASVNNQS
KRLLQSQAVV LKPDQQATLT AQQLTVSAID AEGTIAWTKK DFTFRNMPLE AIMNVVASWY
DVDIIYQQKP NIVLLGGSLQ RSDQLDELLA ALTLASNMHF KVHGRQVTVI KQ