Gene Phep_2374 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2374 
Symbol 
ID8253481 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2771416 
End bp2772183 
Gene Length768 bp 
Protein Length255 aa 
Translation table11 
GC content42% 
IMG OID644936024 
ProductNuclease-associated modular DNA-binding 1 
Protein accessionYP_003092640 
Protein GI255532268 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.100378 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCAGATA TAAATTATTC GGAGCAAATG CCTCAACTAC AAAAAAATAA CGCTCAAAAA 
GAAAAAGGCA GTCACCAAAT CAGCCGTTAT TCTTTATCGG GGCAATTACT GGAAACCTAC
GCCAATGCAA AAGTTGCAGC AGCAGCAATG GGTACACACC AGGTATTTCT TTCCAGTGCA
GCCAGAAAAA GCAGCAAACT GTTAACAGCC TGTGGCTATT TATGGAGACG GGGAAATGCG
CCCGAAATAG ATATGAAATC CCTTTTACAG GAAAGATGGT ACCGTTCCTC TCCCCTTGCT
AAAAACCAGC AGACAGTTGG ACAGTATGAT TTACAGGGTA ACCTGATCCG TACCTTTGCC
AATACCATAG AAGCTGCAAA AGCTGTAGGT GTTCATAAAA ATGGCATCCG TGACGTAATT
AAAGGCCGCG GACTAACCTA TGGAGGCTTT ATATGGAGTA ATACACTTAA AAAGAAAGTA
CCCGTAGATC CAAAAATCAC ATCCAGAAGA GAGCGGGTTT CACAATACGA TCTGGATGGC
AGATGGCTGG GCTCTCACAA AAATTGCTAT ACAGCATCCA AAGCCACAAA TATAGACAAT
GCACAGATTC ACAATGTATT GAATAATCTT TACCTCACAG CAGGAGGCTT TTTATGGCGT
AAGGGCGAAC AGCTTCGGAT AAACATCAAT GAACTCCGTA AAGACCCACA TTATCCAGGT
TCCTTACTGG AAGAACACAT GAAGAAAAAA AGAAAAAACA AACAGTAA
 
Protein sequence
MPDINYSEQM PQLQKNNAQK EKGSHQISRY SLSGQLLETY ANAKVAAAAM GTHQVFLSSA 
ARKSSKLLTA CGYLWRRGNA PEIDMKSLLQ ERWYRSSPLA KNQQTVGQYD LQGNLIRTFA
NTIEAAKAVG VHKNGIRDVI KGRGLTYGGF IWSNTLKKKV PVDPKITSRR ERVSQYDLDG
RWLGSHKNCY TASKATNIDN AQIHNVLNNL YLTAGGFLWR KGEQLRININ ELRKDPHYPG
SLLEEHMKKK RKNKQ