| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2359 |
|---|
| Symbol | |
|---|
| ID | 8253466 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 2755880 |
|---|
| End bp | 2756542 |
|---|
| Gene Length | 663 bp |
|---|
| Protein Length | 220 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 644936009 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_003092625 |
|---|
| Protein GI | 255532253 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.0386183 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 0.488384 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTATTG CAGAAAACGG CCCTGGTGGT AACCACAAGG GCAAATTAGG GAATGTGGTG
TATTACATGC TGAATGGCAA AAATGTATCG CGTTTAATTG GTAAAACCAC CAAACCTCCT
ACTTTATTAC AACTCGAATC CAGGCTGGCA ACCAAAATGT GCAGCGCAGT GCTCAGCCGT
TTGAAGGGCT TCATCAATAC GGGCTTTAGC GTAGCTGCCA TTAAAACTAA GGACAATGCT
TTTAATGAAG CCACCAAAGC CAACAAAAAG AACATCATCA AAGGAATATA TCCCGATCTG
GAAATTGCTT ACGACCGGCT CCAGGTGAGC ACAGGCCCTT TAATGCCTGC ACAAAACTGG
CTGGTAACGC CAACCGAAAT TGGCTTGCAG TACAGCTGGG ATACCGACCC GGAAATGCCC
TGGCCGGAAG CTACCGACCA GGTGATGATG CTGGCCTATT TCCCTACAGA GGAAAAGGTA
TACTTTAACC TTTTTGGCAA CAGCAGGTTA TCGGGCAGTG ATGTGCTGGA AATTCCGCCT
AGTATGCAGG GTAAATACAT GGAAACCTAT ATCTCTTTTA TTGCTGCCAA CAGGAAACAG
CTGGCTGACA GTACTTATAC CGGGTATTTT AACCCCGAAA CAGCTGAAAC CTTAAATTCA
TAA
|
|---|
| Protein sequence | MAIAENGPGG NHKGKLGNVV YYMLNGKNVS RLIGKTTKPP TLLQLESRLA TKMCSAVLSR
LKGFINTGFS VAAIKTKDNA FNEATKANKK NIIKGIYPDL EIAYDRLQVS TGPLMPAQNW
LVTPTEIGLQ YSWDTDPEMP WPEATDQVMM LAYFPTEEKV YFNLFGNSRL SGSDVLEIPP
SMQGKYMETY ISFIAANRKQ LADSTYTGYF NPETAETLNS
|
|---|
| |