| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2358 |
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| Symbol | |
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| ID | 8253465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2754842 |
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| End bp | 2755519 |
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| Gene Length | 678 bp |
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| Protein Length | 225 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644936008 |
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| Product | pseudouridine synthase |
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| Protein accession | YP_003092624 |
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| Protein GI | 255532252 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0324179 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 0.496956 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGCTTGAAA TTGTATATCA GGACGACCAT TTAATTGCCA TCAATAAACC ACATGGATTA
CTGGTACACC GGTCATCGAT AGCCAATGAT GCGAAAGAGT TTGCATTACA GTTGCTCAGA
GACCAGGTAA ACAGGCATGT TAGCCCAGTA CACCGACTGG ACAGGAAAAC CGGGGGATTA
TTGCTTTTCG CTTTTGAGAA GGATGTGGAA ACCGCAATGC AGCAGAAATT TATGAATGGG
GAAGTACAAA AAAAATACCT GGCTGTACTG CGTGGTTATG CACCCGATCA GATGGCTATC
GATTATCCGC TTGCCAAAGA GAACGGGACG ATACAGGAGG CATTTACTGC TTTTGTTACT
TTAAAGCGTG CAGAGCTGGA TATTGCTTTT GGAAAGCATC CTACTTCCAG GTATTCACTG
GTTGAGGCCA GTCCAACAAC AGGACGTATG CACCAGCTGC GCAAGCACTT TGCACATATA
TTCTATCCGA TAATAGGGGA CCGTAAACAT GGCTGTAACA AGCAGAATAA ATTTTTTAAA
GAGACCTGGG ACATGACTAC AATGTTGCTC CACGCATCGG AATTGACGTT TTTGCACCCG
GTTACCGGTA AACAAGTGCA GCTGAAAGCT TCGGTACAGA CCGAATTTTT GAGGGTGATG
GACTTGATGA AATGGTAA
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| Protein sequence | MLEIVYQDDH LIAINKPHGL LVHRSSIAND AKEFALQLLR DQVNRHVSPV HRLDRKTGGL
LLFAFEKDVE TAMQQKFMNG EVQKKYLAVL RGYAPDQMAI DYPLAKENGT IQEAFTAFVT
LKRAELDIAF GKHPTSRYSL VEASPTTGRM HQLRKHFAHI FYPIIGDRKH GCNKQNKFFK
ETWDMTTMLL HASELTFLHP VTGKQVQLKA SVQTEFLRVM DLMKW
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