Gene Phep_2355 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2355 
Symbol 
ID8253461 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2751074 
End bp2752111 
Gene Length1038 bp 
Protein Length345 aa 
Translation table11 
GC content39% 
IMG OID644936004 
ProductFecR protein 
Protein accessionYP_003092621 
Protein GI255532249 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.204979 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value0.538209 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAAGATC AAAAAGAAAA GCCAACATTA TTGTTCCAAA AATTTTTGGA AGGAAAATGC 
AATGCGATAG AGCTTCAAGT TTTGCTGGAT CATTTCAATG TGCATGATAT TAATGAGGGA
TTGAAGGATT TGGTGAGTAA AGAGCTTCTG TCCAATGAAA TAACAGACCA GCTTATACAG
ATGAAAGTAG ATCGTATTAT TCATGAAACT GATAAGGAAA TAAGAGGGAT TAAAAACCGT
GACCAAAAAC TTCCAAAAAT TGCAAAAATA GATTTATCCA ATTGGAAATG GTTGAGTACC
ATCGCTGCGG CAGTTCTAAT AATCACCTTT GGAATTTTAA ATTTCAGTCA AATTTTGCCC
ATTAAAGGAC AACTGGCGCA TACTGAAGTG CCTAATAGCA AAGTAATCTC GGTTATCCTT
GCCGATGGGA GTAAAATCAC CTTAAACGCA GGGAGTAAAT TGAGTTACCC AAAACAGTTC
AAAGGGAGAA CTAGAGAGGT GTTTTTGGAA GGAGAGGCGA TGTTCGAAGT CGCAAGAGAT
ATCAAAAAAC CCTTTATAGT ACATTCAGGA AATTTACGTA CAACGGTGTT GGGTACCAGT
TTTAATATCA AAGCTTATAA AGGAGACGAA AGAATTCAGG TTACAGTAAT CAGCGGAAAG
GTAAATGTGG TGGAGACTGC AACTGGGCGC AATGTAAACC TTGTGCCAGA TGAACGGGTC
GTTTTCAATG CTAAAACTGC TGGATTTGAT TTACAGCGCA TTCCAAGTGC AGAAAATGCG
ACTAAATGGA AGAATGGCCG ACTGTCCTTC GATGATACAC GGTTCGATGA GGTTGTCCAG
GAGTTTACAA GGAAATACGG ACTGGAAGTT GTGCTGGAAA ATTCTGCAAT CGCTAATTGT
AGGGTCACTA TGGTATTTAA TCAGGAACAT CCTGACGAAA TCCTTAAGAT CTTGGCAGCC
CTTGCTAATG CCGGATATAA AAAAGAAGGT GGTAAAATTA TCTTTTACGG AACCGGCTGC
CCTGATGAAA ATAATTAA
 
Protein sequence
MEDQKEKPTL LFQKFLEGKC NAIELQVLLD HFNVHDINEG LKDLVSKELL SNEITDQLIQ 
MKVDRIIHET DKEIRGIKNR DQKLPKIAKI DLSNWKWLST IAAAVLIITF GILNFSQILP
IKGQLAHTEV PNSKVISVIL ADGSKITLNA GSKLSYPKQF KGRTREVFLE GEAMFEVARD
IKKPFIVHSG NLRTTVLGTS FNIKAYKGDE RIQVTVISGK VNVVETATGR NVNLVPDERV
VFNAKTAGFD LQRIPSAENA TKWKNGRLSF DDTRFDEVVQ EFTRKYGLEV VLENSAIANC
RVTMVFNQEH PDEILKILAA LANAGYKKEG GKIIFYGTGC PDENN