| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2348 |
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| Symbol | |
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| ID | 8253454 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2742847 |
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| End bp | 2743611 |
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| Gene Length | 765 bp |
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| Protein Length | 254 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644935997 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003092614 |
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| Protein GI | 255532242 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.199031 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAACAA GCAGCAAGAT TGCCCTGGTT ACTGGTGGAA GCCGTGGTTT GGGAAGAAAT
ATAGCTTTGG CTATTGCTAA AAAGGGACTG GATGTTATGA TTACCTACAA CAGCAATAAG
GAAGCTGCAG ATGAAGTGGT AGCGGCCATT GAAAAAACCG GACAAAAAGC GAAAGCTTTT
CAGCTGGATA CCAGCAACAC AAGACTTTTT GACGGTTTTA TAAATGAGTT GACCGCTTAC
CTGAATCAAA CTTACGAAAA TCCAAACCTC GACTTCTTGG TCAACAATGC AGGAACAGCC
TTGTATGCCC CGGCAACAGA TACTACAGAA GAACAATTGG ATGCCATTTT TAATATCCAT
TACAAAGGAG TGTTTTTTTT AATTCAGAAA ATATTGCCTT TTATCAATGA GGGGGGTGGA
ATTGTAAACA TATCTTCCGG ACTTACACGA ATTACTATGC CGGGATCTTC TGTGTATGGT
TCTTTGAAAG CTGCAGTGGA AACGCTTACA AGATATTTGG CTAAAGAACT GGGACCAAAG
AAAATACGTG TCAATGTGTT GGCTCCCGGT GCTATTGAAA CTGATTTCGG CGGCGGTCGT
GTTCGGGACA ATAAAGATAT AAACGAGCAA ATTGCCGGTT TTACAGCTTT GGGGCGTGTT
GGTGTGCCGG ATGATATTGG GGGTGTTGTT GCCTTTTTGT GTAGTGATGA GGCCGGTTGG
ATCAATGGTC AACGTATAGA AGTTTCCGGC GGACAAGCCT TATAA
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| Protein sequence | MKTSSKIALV TGGSRGLGRN IALAIAKKGL DVMITYNSNK EAADEVVAAI EKTGQKAKAF
QLDTSNTRLF DGFINELTAY LNQTYENPNL DFLVNNAGTA LYAPATDTTE EQLDAIFNIH
YKGVFFLIQK ILPFINEGGG IVNISSGLTR ITMPGSSVYG SLKAAVETLT RYLAKELGPK
KIRVNVLAPG AIETDFGGGR VRDNKDINEQ IAGFTALGRV GVPDDIGGVV AFLCSDEAGW
INGQRIEVSG GQAL
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