Gene Phep_2346 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2346 
Symbol 
ID8253452 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2739763 
End bp2741889 
Gene Length2127 bp 
Protein Length708 aa 
Translation table11 
GC content47% 
IMG OID644935995 
Productpeptidase S9 prolyl oligopeptidase active site domain protein 
Protein accessionYP_003092612 
Protein GI255532240 
COG category[E] Amino acid transport and metabolism 
COG ID[COG1506] Dipeptidyl aminopeptidases/acylaminoacyl-peptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.14976 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.185642 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAAT TATCTTTATT TACCTTGCTT TCCATAATAG GGCTTTGCAA TGCCTGCCTC 
ATTCACGCAC AAACCCTTAG TCTTCGTGAT GTAAAAAGCT ATCCTTTTCC TACAAGTCTT
ACTGCTGCCG CCACTGGCAA CAAAATAGCA TGGGCATTTG ACGAGCAAGG GAAACGAAAT
GTATATGTCG CAGAAGCACC CGATTTTAAA GCAAGAAAAC TTACAGATTA CAATGAAGAT
GATGGTCAGG AAATCAGTAG CCTCTCTATT TCTGCCGATG GAAACTGGGT TGTGTTTTTA
AGGGGGGGCG ATCATGGCTC CAACTGGAAC GATGAGGCAC CAGTAAATGT AAATGCCAGC
CCCGAACCTC CAAAAGTACA GATACACGCA CTGAGCTTTG ATGGCAAACA ACATATCGTA
ATCGGAGAAG GAGAAAACCC GATCCTATCA CCTAAAAGCG ACCAGGTGCT TTTTACCAGG
AAAGGACAGG CATGGATAGC CAGCCTGGCT GCTGAGCCCT TAGCAAAACA ACTGTTCCAG
GCAAATGGCA TTACAGGAGA AATGCAATGG TCACCAAAAG GCAATGCCAT TGCATTTGTG
TCCAACAGGA GCGACCACTC CTTTATCGGT ATTTATACCG ACAAGAACAC GGCGATAAAA
TGGCTTTCTC CCTCCTTTAA CCGCGACAGG TCGCCCCGAT GGTCACCAGA CGGAGACCAA
CTGGCATTTG TCCGTACACC AGGACGTGGC GGAGCAACAG ATTCTATTTT AAGCAGAAAA
CATCAACCAT GGGCCATCTG GAATACTGAC CTGAAAACCA TGGAAGCCAG ACAGGTATGG
AAAGCCCCAC AGACCCTTGC AGGATCGCCG CCTACCACCC AGGGCGGGAC CAATTTAAAC
TGGGGTACCG GCAACCGGAT CCTGTTCGTC TCTGCCCAGG ACGGCTGGTC TCATCTCTAC
AGTATTCCAG CCGCTGGCGG GCCCGCTTTA TTACTTACCC CAGGGGAATT CATGGCCGAA
CATATCGTTT TGAGCCCAGA TAAGAAATGG CTTTACTTTA GTGCCAATAC GGGCAAAGAT
TCCAAAGATA TAGACCGGCG TCATATCGCT CGTGTGCCTG TAAACAAAGC AGCAATGGAA
GTGATAAGTG AAGGTACGAA CCTGGAATGG ACGCCTGCAA TTACCGGAGA CTCAAAATAT
ATCACCTTCA TTACCTCTAT CGGGCAACAA CCACCATTGC CGGCAGTTAT TCAATTGGAT
AAATTAAAAC AGTTCAATAA AGAAATTAAA CTGATAGCTA AAGAAAATAT ACCCGCTAGC
TTTCCAACAT CACTATTGAC CGCACCAAAA CAAGTATTTT TTCATGCTCC GGATGGTTTG
CTGATCCATG CGCAGCTCTT TGAAGGAAAA GGAAAAGCAC AAAAAAAACC GGCCATCATT
TACATCCACG GCGGACCTTC CAGGCAGATG TTACTGGGCT GGAACTATTC CGAGTACTAT
ACCAATGCCT ATGCCATGAA CCAGTACCTG GCCAGTTTAG GCTTTACCGT ACTTTCCGTG
AATTACCGCA TGGGTATCGG TTATGGATAT GAATTCCAGA ATGCCCCCAA TTGTGGTACC
AAAGGCGCCG CAGAATATCA GGACATTAAA TCAGCAGGCC TCTGGCTCAG CAAGCAGCAA
AACATTGATG CCAGCAGGAT CGGAGTTTAC GGTGGCTCCT ATGGTGGCTA TCTGACCAAT
ATGGCGCTGG CTAAAGATTC AAAACTTTTT GCAGCCGGTG TAAGTATACA CAGTATGGGC
GATCTTACCC TCGACAATGA CCGCCGCATG CCCGAACGTT TCGAAAAAGC ACCAGATGCC
GAACTGGCCT TAAAAACCAT ATGGGAATCA TCCCCCGTTG CCCATATCGG CGGCTGGACA
TCTCCGGTGA TGCTCATCCA TGGCGATGAC GACCGCAACG TGCATTTCAG CCAGAGTACC
GACCTGAACA AAAGGCTTCT GGAAAAAGGC ATTGAGGTCA GCTCGCTTGT TATTGTTGAC
GACACCCATC ACTGGATGAA ATATGAAAAT GTAATGAAAG TTAACCAGGC AGTTGCCGAT
TTCTTTAGTA GAAAGCTAAT GCCATGA
 
Protein sequence
MKKLSLFTLL SIIGLCNACL IHAQTLSLRD VKSYPFPTSL TAAATGNKIA WAFDEQGKRN 
VYVAEAPDFK ARKLTDYNED DGQEISSLSI SADGNWVVFL RGGDHGSNWN DEAPVNVNAS
PEPPKVQIHA LSFDGKQHIV IGEGENPILS PKSDQVLFTR KGQAWIASLA AEPLAKQLFQ
ANGITGEMQW SPKGNAIAFV SNRSDHSFIG IYTDKNTAIK WLSPSFNRDR SPRWSPDGDQ
LAFVRTPGRG GATDSILSRK HQPWAIWNTD LKTMEARQVW KAPQTLAGSP PTTQGGTNLN
WGTGNRILFV SAQDGWSHLY SIPAAGGPAL LLTPGEFMAE HIVLSPDKKW LYFSANTGKD
SKDIDRRHIA RVPVNKAAME VISEGTNLEW TPAITGDSKY ITFITSIGQQ PPLPAVIQLD
KLKQFNKEIK LIAKENIPAS FPTSLLTAPK QVFFHAPDGL LIHAQLFEGK GKAQKKPAII
YIHGGPSRQM LLGWNYSEYY TNAYAMNQYL ASLGFTVLSV NYRMGIGYGY EFQNAPNCGT
KGAAEYQDIK SAGLWLSKQQ NIDASRIGVY GGSYGGYLTN MALAKDSKLF AAGVSIHSMG
DLTLDNDRRM PERFEKAPDA ELALKTIWES SPVAHIGGWT SPVMLIHGDD DRNVHFSQST
DLNKRLLEKG IEVSSLVIVD DTHHWMKYEN VMKVNQAVAD FFSRKLMP