| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2333 |
|---|
| Symbol | |
|---|
| ID | 8253439 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | - |
|---|
| Start bp | 2719348 |
|---|
| End bp | 2720661 |
|---|
| Gene Length | 1314 bp |
|---|
| Protein Length | 437 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644935982 |
|---|
| Product | aspartate kinase |
|---|
| Protein accession | YP_003092599 |
|---|
| Protein GI | 255532227 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0527] Aspartokinases |
|---|
| TIGRFAM ID | [TIGR00657] aspartate kinase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.299294 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 19 |
|---|
| Fosmid unclonability p-value | 0.136558 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGTAT TAAAGTTTGG AGGCACTTCT GTAGGAAGCC CTGAGCGCAT GAAAAAATTG
CTGGATATCA TTGATCCTGC AGAAGAACAA ATTGTCGTGT TATCGGCTGT GTCTGGTACC
ACCAATAGTT TAGTGGAAAT TTCAGCCAAA CTTTTAAAGG AGGATAAACA GGAGGCGTTA
AACTTAATTA ACGCATTACA TCAAAAATAT AATGAGTTTG TAATTGAACT TTTAGCAGAT
GGTGAATATC GTGAACAGGG ACAGGAAGTA GTAGATTATC ATTTCAGCTT CTTAAGTTCA
CTGACCAATG ATATTTTTAC TACTGTTGAA GAGAAAGTCG TACTTGCACA GGGTGAACTG
TTGTCGACCA CCTTATATCA CATTTATTTA AAATCCATTG GCGTACCTTC TGTATTGCTG
CCCGCATTGG ATTTTATGAA AATTGATGAG GACAACGAGC CTGATGTCCC TTTTTCTACT
AAGCAATTGC AACCCCTGTT AGCACAACAT ACCGGCAATA AGCTCTTCAT TACTCAAGGT
TTTATCTGCC GGAACAGCTT TGGCGAAGTT GATAACCTGC GCCGCGGTGG AAGCGATTAT
ACGGCTTCGC TAATTGGTGC AGCAATTAAA GCTGAGGAGG TACAGATCTG GACAGACATT
GATGGGATGC ACAATAATGA TCCAAGGATT GTAAAAGGTA CTAAACCTAT AGCACACTTG
TCTTTCGATG AAGCTGCCGA ACTGGCCTAT TTTGGTGCAA AGATACTGCA TCCACAATCT
GTTTTTCCTG CACAGAAATA TAAAATTCCG GTAAGACTGT TAAATACAAT GGAACCAAAA
GCTGCGGGAA CATTGATTTC TACCGAAAGT GAGAAAGGAA AAATCAAATC CATTGCTGCA
AAGGACGGGA TTACAGCAAT TAAGATACAG TCGAGCCGCA TGCTCCTGGC CTATGGATTT
TTAAGGCGGG TATTTGAAAT TTTTGAAAGG TACAAAACAC CAATTGACAT GATCACTACT
TCTGAAGTAG CGGTTTCATT AACAGTTGAT TATACAGACA ACCTGGAAAA AATCGTAGAA
GAACTGCATG CTTTTGGAAC AGTAGAAATT GACAGCGATC AATCTATTGT TTGTGTGGTT
GGCGATTTTA GTGCAGAAAA ACATGGTTAT GCAGCCCGTG TACTGGATGC CATAAAGCAT
ATTCCATTAA GGATGATCTC ATATGGTGGA AGTAATTATA ACATTTCATT GCTAATCAGT
ACTGCAGACA AAACGGAAGC TTTAAAAAGT TTGCACAACA GATTGTTTGA ATAA
|
|---|
| Protein sequence | MKVLKFGGTS VGSPERMKKL LDIIDPAEEQ IVVLSAVSGT TNSLVEISAK LLKEDKQEAL
NLINALHQKY NEFVIELLAD GEYREQGQEV VDYHFSFLSS LTNDIFTTVE EKVVLAQGEL
LSTTLYHIYL KSIGVPSVLL PALDFMKIDE DNEPDVPFST KQLQPLLAQH TGNKLFITQG
FICRNSFGEV DNLRRGGSDY TASLIGAAIK AEEVQIWTDI DGMHNNDPRI VKGTKPIAHL
SFDEAAELAY FGAKILHPQS VFPAQKYKIP VRLLNTMEPK AAGTLISTES EKGKIKSIAA
KDGITAIKIQ SSRMLLAYGF LRRVFEIFER YKTPIDMITT SEVAVSLTVD YTDNLEKIVE
ELHAFGTVEI DSDQSIVCVV GDFSAEKHGY AARVLDAIKH IPLRMISYGG SNYNISLLIS
TADKTEALKS LHNRLFE
|
|---|
| |