| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2332 |
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| Symbol | |
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| ID | 8253438 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2718000 |
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| End bp | 2719154 |
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| Gene Length | 1155 bp |
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| Protein Length | 384 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644935981 |
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| Product | diaminopimelate decarboxylase |
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| Protein accession | YP_003092598 |
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| Protein GI | 255532226 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0019] Diaminopimelate decarboxylase |
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| TIGRFAM ID | [TIGR01048] diaminopimelate decarboxylase |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.247782 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.140029 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTTTTCTA ATAAAGATAT ATCACGTTTC GCAAATTTAG AAACACCGTT CTATTATTAC
GACCTTAACC TGTTGCAAAA TACGTTAAAT GCATGCGCAA ATGCTGCTAA GTTATACAAT
TTTCATGTGC ACTATGCCTT AAAAGCGAAC TTCAATCCAG CGGTACTGAA AAAAGTAAAG
GCAATTGGCT TTGGTGCTGA TTGCGTGAGT GGAGGGGAAG TGAACAGGGC TATTGAAACA
GGCTTTAATC CTAAACAAGT GGTTTTTGCA GGTGTGGGTA AATCTGATAA AGAAATTAAT
TTGGCATTGG ACCAGGATAT ATTTTGTTTT AATGTAGAAT CTGTTCAGGA ACTTGAAGTG
ATCAATGAAC TGGCTGGCAA AAAAGGCAAA ATAGCGAAAA TTGCTATACG TATCAATCCG
AATGTTGATG CCCATACCCA TCACAACATT ACTACTGGTC TGGACGAAAA TAAGTTTGGT
GTAAATTCCT GGGATCTTCC GAAATGTGTA GAGACCTTAA AGGTATCTGA ACACCTTGAG
TTCTTAGGCA TACATTTCCA CATCGGGTCG CAGATTACTA ATCTTGATGT ATATAAAAAC
TTATGCGTAA GGGTTAATGA ATTTGCGATA TGGTTTGAAG AGCGCGGTTT TAATGTAAAA
ATATTAAACG TGGGTGGGGG CTTAGGTATT GACTATCATA ATCCGGAGCA GCAGATTCCT
GATTTCGATG CTTATTTTAA GATCTTCTCA GAATTTCTTG AGGTTAAGGC TGGCCAGGAA
GTTCATTTTG AGCTGGGCAG GGCTTTAGTA GGGCAATGTG CCTCACTGAT CAGCAGGGTT
TTATATATAA AAAATGGTAA AAAGAAAAAT TTTGTAGTGC TGGATGCAGG TATGACAGAG
TTGATGCGCC CAGCCTTATA TCAAGCTTAC CACAAAATCG AGAACCTTAG TCGTGGGAAT
CAAACAACAT TAAAATATGA TATAGTGGGA CCAATATGTG AAAGTACAGA CTGTTTTGGT
AAAGAAGTAG AACAGCCCGA AAGTTTCAGG GGAGATCTTT ATGCCATCAG AAGTGCAGGA
GCATACGGAG AAGTAATGGC ATCAAAGTAC AACCTGAGAG ATGAGATCAG GTCTGTTTAC
AGTGAAGAAG CATAA
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| Protein sequence | MFSNKDISRF ANLETPFYYY DLNLLQNTLN ACANAAKLYN FHVHYALKAN FNPAVLKKVK
AIGFGADCVS GGEVNRAIET GFNPKQVVFA GVGKSDKEIN LALDQDIFCF NVESVQELEV
INELAGKKGK IAKIAIRINP NVDAHTHHNI TTGLDENKFG VNSWDLPKCV ETLKVSEHLE
FLGIHFHIGS QITNLDVYKN LCVRVNEFAI WFEERGFNVK ILNVGGGLGI DYHNPEQQIP
DFDAYFKIFS EFLEVKAGQE VHFELGRALV GQCASLISRV LYIKNGKKKN FVVLDAGMTE
LMRPALYQAY HKIENLSRGN QTTLKYDIVG PICESTDCFG KEVEQPESFR GDLYAIRSAG
AYGEVMASKY NLRDEIRSVY SEEA
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