Gene Phep_2319 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2319 
Symbol 
ID8253425 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2700549 
End bp2701499 
Gene Length951 bp 
Protein Length316 aa 
Translation table11 
GC content42% 
IMG OID644935968 
ProductArginase/agmatinase/formiminoglutamase 
Protein accessionYP_003092585 
Protein GI255532213 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0010] Arginase/agmatinase/formimionoglutamate hydrolase, arginase family 
TIGRFAM ID[TIGR01229] arginase 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value0.239055 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACTAAGA CTTTAAAAAT TATAGAAGTA AAATCTGAGA TTGGTGCTGG CACTCGCGGG 
GCCAGTTTAG GAGTGGATGC AATTAAGATT GCAGCACTCG ATTTTGGCAG CAGATTTTTT
AAAAAACATA AGTCTGTAGA AATCCCTAAT GAAAACCATT TATTGCTGGA AAGTACGGGC
AGCCCATTTG CAAAACGGAT TTCGGGTATT TTGACGATGG TAGAGCGGGT GAGTGATGAA
GTAAGTGCTA CCTTAAATAA AGATGAATTT CCGATTGTTC TGGCAGGCGA CCACAGCACA
GCTGCCGGTA CTATTGCCGG AATTAAAGCA GTACATCCGA AGGCAAAATT AGGTGTGGTA
TGGATAGATG CGCATGCAGA TTTACATTCT CCTTACACTA CACCTTCAGG AAATATGCAT
GGAATGCCTT TGGCTATGGC ACTCGATGAA GATAATTTAG ATGCCAAAGT GAACAAGCTT
GACCAGGAAA CCATCAATTA CTGGTACCAG CTTAAAAATG TGGGTAAGAT AGCGCCTAAA
ATCAGTTACC GCGACCTGGT ATTGATCTCT GCAAGAGAGA TGGAGCGCCC GGAAGAACAA
TTGCTTAAAA AGAACAAGGT AAAAATATTT ACTACTGCAG AACTGCGGAA AAGAGGAGTG
GAACGGACGG TAATAGAAAC GCTTAAGTAC CTGGACCATT GCGACCTGAT CTATGTTTCT
TTTGATGTAG ATTCACTTGA CCCAACGGCC TCAAGAGGAA CCGGAACACC GGTTGCGCAG
GGATTAACGG AAAGGGAAGC GGGTAATTTA ATGTCTCGCC TGATTACTAA CCAAAAGGTT
TGCTGCTTTG AAATTGTAGA AGTAAACCCA ACATTAGACC GGGAGAACCA AATGGCAGAG
CATGCCTTTG AAATTTTAAT TAAAGCTACC AATGCTTTCA GAAACGAATA G
 
Protein sequence
MTKTLKIIEV KSEIGAGTRG ASLGVDAIKI AALDFGSRFF KKHKSVEIPN ENHLLLESTG 
SPFAKRISGI LTMVERVSDE VSATLNKDEF PIVLAGDHST AAGTIAGIKA VHPKAKLGVV
WIDAHADLHS PYTTPSGNMH GMPLAMALDE DNLDAKVNKL DQETINYWYQ LKNVGKIAPK
ISYRDLVLIS AREMERPEEQ LLKKNKVKIF TTAELRKRGV ERTVIETLKY LDHCDLIYVS
FDVDSLDPTA SRGTGTPVAQ GLTEREAGNL MSRLITNQKV CCFEIVEVNP TLDRENQMAE
HAFEILIKAT NAFRNE