| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2317 |
|---|
| Symbol | |
|---|
| ID | 8253423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Pedobacter heparinus DSM 2366 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013061 |
|---|
| Strand | + |
|---|
| Start bp | 2697566 |
|---|
| End bp | 2698699 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 644935966 |
|---|
| Product | protein of unknown function UPF0118 |
|---|
| Protein accession | YP_003092583 |
|---|
| Protein GI | 255532211 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG0628] Predicted permease |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 21 |
|---|
| Fosmid unclonability p-value | 0.255461 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGACA TGCCGCTAAC CGTCAGAAGA TCTATTGAAC TACTTGGAAT TGCCCTTATT
GGTGCCATTC TTGTCATTGG AAATGATATC ATTATGCCAG TTATCATGGC TTTTTTTATC
AGCATCGTGC TGCTTCCAAT ATTTCGCTTC TTAAAAAAAC ACAAGTTTCC AGAAATAGTC
GCCATTATAC TCCCTATCCT GCTGGTTGCA ATTTTTGTAG GAGTAATTGT ATGGTTCTTT
TCCGCTCAGA TTGGTGTTTT AGTTGCCGAT TTCCCACAGA TAAAAAATAA TGTAAACTCA
CACTTAAAAT CACTCAGCGA ATGGTTTAGC ACTATAAGCC ATGTTTCAAC AAGGGAACAG
ATGAAGTTCA TTACTGAAAA AAGTGATGAT TTATTAGGAA TGGCTGGAAA AGCAGCAAGC
GGGGCTGCTG TAACGCTAAG TTCCATTTTT GTATTTGTCG GACTACTTCC GATTTACATC
TACCTGATGC TTTTTTATAA GGATATATTA CTTCGCTTCA TCTTCATGTG GTTTAAATCC
GATCACCACC CAAAAGTAAA AGAAGCGATC TATGAGACTG AAGCCATCAT CAAAAATTAC
CTGGTAGGAT TATTGATCCA GGTGACCTAC ATGACCATCC TTCTGGGTGG AATCCTGTTG
CTGGTAGGGA TTAAACATGC CTTATTAATT GGTGTTATTT TCGCTATTTT AAACCTTATT
CCATATGTGG GTGCATTAAT TGGAAACATT ATAGGTGTAT TACTTACCCT CACCTCATCA
ACTGAACTAT GGCCTGTAAT TACCGTACTT GGCGTAATAG CCGTTGTTCA GTTTTTAGAC
AATAACATAT TAATGCCCAG AATAGTTGGT TCCAAAGTAA AGATCAATGC CTTGTTTGCC
ATCCTGGGTG TAATTGTTGG TGGCAGTATC GCAGGTGTCT CCGGTATGTT TCTCTCCATG
CCCATTATAG CCGTTTTAAA AGTGATTTTC GACCGGACCG AAACCTTTAA ACAATGGGGG
GTGCTATTTG GTGATGAAAG ACCTTCAAAA AGCCCCATGA CCTTTCCTGC TTTCCGGAAA
AAGAAAATTA TACCTGTTAA GGCAGGCGTA GAAAAAACAA AAGAGAAGGA TTAA
|
|---|
| Protein sequence | MKDMPLTVRR SIELLGIALI GAILVIGNDI IMPVIMAFFI SIVLLPIFRF LKKHKFPEIV
AIILPILLVA IFVGVIVWFF SAQIGVLVAD FPQIKNNVNS HLKSLSEWFS TISHVSTREQ
MKFITEKSDD LLGMAGKAAS GAAVTLSSIF VFVGLLPIYI YLMLFYKDIL LRFIFMWFKS
DHHPKVKEAI YETEAIIKNY LVGLLIQVTY MTILLGGILL LVGIKHALLI GVIFAILNLI
PYVGALIGNI IGVLLTLTSS TELWPVITVL GVIAVVQFLD NNILMPRIVG SKVKINALFA
ILGVIVGGSI AGVSGMFLSM PIIAVLKVIF DRTETFKQWG VLFGDERPSK SPMTFPAFRK
KKIIPVKAGV EKTKEKD
|
|---|
| |