| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2313 |
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| Symbol | |
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| ID | 8253419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2692039 |
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| End bp | 2692797 |
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| Gene Length | 759 bp |
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| Protein Length | 252 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644935962 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003092579 |
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| Protein GI | 255532207 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.196327 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 0.109042 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATGAATA ACAGGTTTGA GAACCAGGTG GCCGTTGTAT CTGGCGGAGC CGCTGGAATC
GGTAAGGGTA TTGCCCACAG GATTGCAGCA GAAGGAGGCA CGGTAATTCT TTTTGATATT
AATAAAGCTT TATTGCAAGA TGTTGTGGCC GAATTCAGAG CGCTGAATTT TACGGCAGAT
AGTTATGCCG TAGATATTTC TGATGAAAAC GCGGTGAAAG CTGCATTTGA AAAGGTTGAA
GAATTATATA GTAAAATTGA CGTAATGATT AATTCAGCCG GTATTGTAGG CCCTACAAGT
ACTAAAATAA CGGATTACCC TGTGCATGCC TATGATAGAG TTTATGCCAT TAACTTACGT
GGTAGTTTTT TAATGGTCAA ATATGCGATT AAGGTAATGG AGAAGAATGA TTATGGGCGG
ATATTATTAA TCGCATCAAT TGCGGGCAAA GAAGGCAACC CATTTATGGC GGGATATTCA
TCCATGAAGG CAGGGGTAAT CGGTTTGGTT AAAGGAATTG GTAAAGAGTA TGCCGGTACC
AAAATCACAA TCAATGGCCT AGCACCAGCA GTCATTGGCA CTGCAATGAA CAACGAAACA
TCGCCTGAAC AGCTGGCATA CATGATCAGT AAAATCCCTA TGAACAGGCT CGGTACCGTA
GAGGAGGTGT CTTCCATTTC GACGTGGATA GTTTCTGAAG AAGCAAGTTT TACTACAGGT
TTTGTGTTTG ATATCTCTGG GGGTAGGGCA ACGTATTAA
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| Protein sequence | MMNNRFENQV AVVSGGAAGI GKGIAHRIAA EGGTVILFDI NKALLQDVVA EFRALNFTAD
SYAVDISDEN AVKAAFEKVE ELYSKIDVMI NSAGIVGPTS TKITDYPVHA YDRVYAINLR
GSFLMVKYAI KVMEKNDYGR ILLIASIAGK EGNPFMAGYS SMKAGVIGLV KGIGKEYAGT
KITINGLAPA VIGTAMNNET SPEQLAYMIS KIPMNRLGTV EEVSSISTWI VSEEASFTTG
FVFDISGGRA TY
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