| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2312 |
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| Symbol | |
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| ID | 8253418 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2691256 |
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| End bp | 2692032 |
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| Gene Length | 777 bp |
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| Protein Length | 258 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644935961 |
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| Product | short-chain dehydrogenase/reductase SDR |
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| Protein accession | YP_003092578 |
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| Protein GI | 255532206 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
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| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.315776 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0684452 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGAAAAGAG AAAATCAATC ATCTATAATG AAAAAGGCAA TTATTTTGGG CGGTTCTTCC
GGAATCGGAA AGGCTACCGC AGAAAGGTTT GCCAGAGAGG GATGGACCGT TATAATTGGA
TCATCTAACC TTAAAAAAGC TCGCGGTGTA ATTGACGCGC TGGAAGGACA AGGCCATATG
GCTTGTGAGG TTGATGTGAG AAACGAGAAG CATATAGCGC AACTTCGTAA AACTGTGACC
GAAGTTTTTG GAGATTTTGA CGTGCTCATA AACAGTGTGG GAATTTCTGC AGCCAGTGAT
TCCCTTATTT CGGAGTTTGA CAACTGGGAC GATTCAATTC AGACCATGTT ATATGGTACT
GTAAAAAGTT GCAGAGCATT AGTTTCACTA ATAAAAAATG GAGGCCGCAT TATTCACATT
ACTTCTATCC ATCATGAACG GGTAGAACAT GGTAGTTCTG CCTATGGCAT GGCTAAGGCC
GCAATTACCC AATTTACCAG ATCCCTTTCC CTCGAATTAG CTTCTAGAAA TATATTAGCC
AATACCATTG CTCCCGGCTT TATTAATACA CCTATGTCTG TAAAAGCTGA TGGAAAGAGT
GAATTGGAAA CTAAGTGGTT TAAAGACAAT TATATTGATT CTCATCACTT GCCTTTAAAG
CGTGCGGGTG AGCCTGAGGA AGTTGCCGGA GTAGTCTATT TTCTTGCAGG GCCCGATGCT
TCTTACATAA CAGGTTCTGT TTTAACGGTA GACGGAGGTT TAACCATCAC TTTTTAA
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| Protein sequence | MKRENQSSIM KKAIILGGSS GIGKATAERF AREGWTVIIG SSNLKKARGV IDALEGQGHM
ACEVDVRNEK HIAQLRKTVT EVFGDFDVLI NSVGISAASD SLISEFDNWD DSIQTMLYGT
VKSCRALVSL IKNGGRIIHI TSIHHERVEH GSSAYGMAKA AITQFTRSLS LELASRNILA
NTIAPGFINT PMSVKADGKS ELETKWFKDN YIDSHHLPLK RAGEPEEVAG VVYFLAGPDA
SYITGSVLTV DGGLTITF
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