| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2300 |
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| Symbol | |
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| ID | 8253406 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2675070 |
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| End bp | 2676161 |
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| Gene Length | 1092 bp |
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| Protein Length | 363 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644935949 |
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| Product | glycosyl hydrolase family 88 |
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| Protein accession | YP_003092566 |
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| Protein GI | 255532194 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4225] Predicted unsaturated glucuronyl hydrolase involved in regulation of bacterial surface properties, and related proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.00753245 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 0.0687608 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAGATTA ACTTTAAAAC ATTTGGAATG CTACTGGTCA GTAGTTTCAC ATGGTCGGTT
GCAGTACATG CACAGCAGTT CACTAAAAAA CGAATCATTG ACAAGATGAC CAAAGTTGCT
GACTGGCAAG TGGCCCAGAG TTGGTCAACT AGTAAGCCAG GCAACCCACC AACTGGTAGC
CGCTCTTGGG AGGCTGGTGC TTTTTATCCA GGTGTAATGG ACGCCTACAG GGCTACCAAA
AATGAGAAGT ATATGGAGGC CGTAAAACTG ATGGCCGAGA GCAATCGATA TGACCGTGGA
CCTAAACTTA GGAATGCAGA CGATCAGGCG ATTTTGCAAA CTTATCTTGA AATGTATGAA
TTTACTGGAG ATCCGAAACT ATTGACGGCC ACAAAAAGAA CTTTAGACTC GATCATGCTG
TCGCCAAAGC CAGGACGCTT AGAGTTTTCT TGGTGTGACC TTTTATTTAT GGCACCACCC
ATCTGGAGTC GCTATTCGGC CATTAGCAAA GATCAAAAGT ATCTCGATTA CTTGGCGGAA
ATCTATTGGG ATGCTGCTGA CAACCTACAA AACAAAACCT ATAAACTATT TTATCGTGAC
AATAGATTTA AATCTATCGT TGGATCAACA GGTAAACCGG TATTCTGGAG TCGTGGGAAT
GGGTGGGTGG TTGCTGGTCT TGCGCGTACA CTAGAAGCGA TGCCGGCACG CTATCCAGGT
CGGAAAAAGT ATGAAGATTT ACTTATTGAG CTAGCATCTT CACTAAAATC TCTTCAGCAG
CCCGATGGAT TCTGGAAGTC GGATCTGCTA GACCCAGAGA TTTATCCAAT GGGAGAAACC
AGTGGCACAG CGTTCTTTTG TTATGGGATT GCCTGGGCGA TAAATCATAA GCTGCTTGAT
CGCAAAGAAT ACTTGCCAGT GGTACTAAAA GCATGGAATG CGCTGAATAG TGTAGTTTTA
GCCGACGGCA AGCTCGGCTT TGTGCAACCA GGCGGCGATA GACCCTATCT TTCAACCGCG
AATATGAGTA ATTGGTATGC AGCTGGTGGT TTTTTAATGG CGGGAAATCA AGTTTTAAAA
TTTGCAAGGT AA
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| Protein sequence | MKINFKTFGM LLVSSFTWSV AVHAQQFTKK RIIDKMTKVA DWQVAQSWST SKPGNPPTGS
RSWEAGAFYP GVMDAYRATK NEKYMEAVKL MAESNRYDRG PKLRNADDQA ILQTYLEMYE
FTGDPKLLTA TKRTLDSIML SPKPGRLEFS WCDLLFMAPP IWSRYSAISK DQKYLDYLAE
IYWDAADNLQ NKTYKLFYRD NRFKSIVGST GKPVFWSRGN GWVVAGLART LEAMPARYPG
RKKYEDLLIE LASSLKSLQQ PDGFWKSDLL DPEIYPMGET SGTAFFCYGI AWAINHKLLD
RKEYLPVVLK AWNALNSVVL ADGKLGFVQP GGDRPYLSTA NMSNWYAAGG FLMAGNQVLK
FAR
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