| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2299 |
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| Symbol | |
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| ID | 8253405 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2671379 |
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| End bp | 2674549 |
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| Gene Length | 3171 bp |
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| Protein Length | 1056 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644935948 |
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| Product | TonB-dependent receptor plug |
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| Protein accession | YP_003092565 |
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| Protein GI | 255532193 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG4206] Outer membrane cobalamin receptor protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.531432 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 0.0856053 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTTTTAG TATACAGCAC GGCAGTTTAC GCCGGTTCAG CAGGGAAGCT AGGTGCAGCT
AGAGCGAGTT CAGTTCTGAA CGATCTTGAG CGTCACGGAA AAAACTTGAA AATACAAGTG
ACGGGCACTG TTCGGGATTC TGTTGGCTTT TTACCTGGTG TGAGTATTAA AGTGAGAGGT
ACCAACTTAG GCACCACCAC AAACGAAACC GGTAAATACA TTTTGGACGT ACCCGACGGA
AACGTAACCC TAATATTTTC GATGGTTGGC TTTGAGCCAC GAGAAATACC ACTGAACGGA
AGAACGAAAC TTGATGTAAT ACTTAAACCT TCCGGTGAGT CACTAGGCGA GGTTGTAGTT
GTCGCCTATG GTAAGCAAAA GAAAACAGAC TTAATCGGAG CTGTTACAAC GGTGGACCCA
AAAATTTTAA AAACATCATC CAGTAATCTC ACTACCGCGC TTGCTGGCCG GGTTGGCGGC
GTAATTGCAT TTCAAAGAAG CGGTGAACCG GGTGCAGATA ATGCGTCGTT TTTCATACGC
GGAGTTACCA CGTTTGGATA CAAAGCAGAG CCGCTTATCC TGATAGATAA TATAGAGTTG
TCAACAACAG AGCTTGCACG TTTGCAACCT GATGATATTG CAAGTTTTTC AATTTTAAAA
GACGCCACTG CTACATCATT ATATGGAGCG AAAGGTGCCA ATGGTGTAAT TCTGGTTTCC
ACCAAAGAGG GTAAAGCCGG AAAGCCTAAG TTTAGTTTTA GGTTGGAAAA CCCTATCTCT
TCAAACACTA GGAATGTTGA ATTGGCGGAT CCGATAACTT ATATGAGATT GAATAACGAA
GCTGTATTAA CCAGAACACC CCTAGGTGAA TTACCTTACA CCGAAAATCG GATTGATGCT
ACTATCGCTG GCAAAAATCC CCAAGTCTAT CCTGCTGTTA ATTGGAGAGA AGAGCTAATC
AAGGATTATA CATCCAATCA GCGGATGAAC TTAAACTTAA CAGGTGGAGG TGAAGCAGCC
CAATATTATC TGGCAGGTAC ATTTAATCAA GATAACGGAC TGCTGAAAGT AGATAGAAAT
AACGATTTTA ATAATAATAT TAAGTTGAAG AGTTACGGTT TACGGTCAAA CGTAAACATA
AATGTAACGA AGTCTACGAG GGTGGGAGTA AGGTTGTATG GTACATTCGA CGATTATAAT
GGTCCCATTG ATGAAGGTGC TGCGCTGTTC AGGAAGGTGA TGCGCACCGT TCCTACCTTG
TTTCCGGCAA GATATACTCC AGATGCAGCA AATTCAGCGA CAAAACATAC CTTATTTGGA
AATAGCTTAA ATGGGGACAA TTTTTACATC AATCCATATG CCGACATGGT AAGCGGGTAT
AAAGATAAAT CAAAATCGCT GATGCTTGCG CAATTCGAAC TCACGCAGAA TTTATCGTTT
ATTACCGAAG GATTATCAAT AAATGCACTT GGAAATACGA ACAAGGAAGC ATCGTTTGAC
GTCAAAAGGG AATATAATCC ATTTTTCTAT TCCGTTAGCG CTTATAATAA ATTTGACGAC
TCTTTTGTGT TGCGAGAACT TAATTCGAAC TCTGGTACAG AGACTTTAGA CTATTCTGAA
GGAACAAAAG TTGTTAAGTC TAATACCACT TTACAGACTG CATTGACGTA TAACCGTATT
TTTCAGGCAA AGCATAGCGT GAGTGCGTTG TTAAATTTTA AGGTACTGGG ATCGATAGAA
GCAAATGCGA ACACGCTGCA AAAATCGTTG CCGAGCAGGT CAGCCGACTT AGCAGGACGG
GCCACTTATT CGTTTAATAA CCGCTATTTT GCTGAATTTA ACTTTGGATA CAATGGGTCG
GAACGTTTTT ACGAAACCCA ACGTTTTGGG TTTTTCCCTT CTGCGGGTAT AGCTTGGGCT
GTTTCAGAAG AAAAGTTTAT GGCGCCGGTC AAAAAAGTTC TGTCAAAACT GAAGTTGAGA
GGAACGTACG GGTTAGTAGG TAATGGAGAT ATAGGAAGTT CAGACGACCG CTTTTTCTAT
TTGTCCAATA TATCCTATAA CGGTCCTACA ACCTCATTCG GAACGGACTA CTCCTACGGG
AGAACTGGAG TAAACGTAAC TCGTTATGAG AACAGAGACA TTACGTTCGA ACGGTCTAAG
AAATTAAATA TTGGACTCGA TTTAGGCTTG TTCAATAAGT TCGACCTACA AGCTGATTAT
TTTACCGAAC AAAGAACTGG AATTTTGCAA ACCCGTGCTT CTTTGCCTAA GTCCTTAGGC
TTAACAGCGG CAGTAAGAGC TAACGTGGGT GCAGCTTCAG CCAGTGGGAT AGATATAAGC
AGCAGTTACT CACAGTTTTT TGGAACCAAC TTTTCTATAC AGGCTTTAGG TAATTTTACT
TATGCCACAA GTAAATATGA AGTCTATGAG GAACCTATTT ATGCCGAAAA AAACCTTTCC
AGGGTAGGTT ATCCAATTAG ACAAACGTGG GGATACATCG CCGAACGACT ATTTGTGGAT
GAGGCTGATG TTGCTAACTC TCCAATTCAG ACTTTTGGCA CTTACAGTGC GGGAGACATT
AAATACAAAG ACGTGAATGG TGATGGACAA GTCACCACAC GTGATCGAGT GCCCATAGGT
TATCCAACCG TTCCGGAAAT CACCTATGGG TTTGGATTCT CTTCAACCTT TAAAAGTTTT
GACCTGGCTT GTTTCTTTCA GGGCTCAGCC AGATCGTCTT TCTGGATGAA TACAAATGGC
TCGACGTCGC CGTTTGCCCC ATATTTTTAC GCAGGTGAAA GCAATGTGAC CGGTGTGCCG
AGAAACCAAT TGTTAAAGGT ATATGCAGAC AGCCATTGGT CTGAAGAGAA TAGGGATATA
TATGCACTTT ACCCGCGGTT AAGTACTCAG GTTCTTGAAA ATAATAATCA AACCAGTACT
TGGTTTATGC GTAATGGCGC ATTTTTAAGA GTAAAATCAG TTCTATTAGG ATATACGCTT
CCCAAAAAGC TAACGAAGAA ATTATTGATG GAGAGCGTTC GATTTTATGC CGAAGGAACT
AACCTTGGTG CCCTAAGCAA ATTCAAGACA TGGGACGTAG AAATGGGCAG CGATGGCCTA
GGCTATCCTT TACAGCGAGT TTATAATTTC GGTTTACAAG TTTCATTTTA A
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| Protein sequence | MFLVYSTAVY AGSAGKLGAA RASSVLNDLE RHGKNLKIQV TGTVRDSVGF LPGVSIKVRG
TNLGTTTNET GKYILDVPDG NVTLIFSMVG FEPREIPLNG RTKLDVILKP SGESLGEVVV
VAYGKQKKTD LIGAVTTVDP KILKTSSSNL TTALAGRVGG VIAFQRSGEP GADNASFFIR
GVTTFGYKAE PLILIDNIEL STTELARLQP DDIASFSILK DATATSLYGA KGANGVILVS
TKEGKAGKPK FSFRLENPIS SNTRNVELAD PITYMRLNNE AVLTRTPLGE LPYTENRIDA
TIAGKNPQVY PAVNWREELI KDYTSNQRMN LNLTGGGEAA QYYLAGTFNQ DNGLLKVDRN
NDFNNNIKLK SYGLRSNVNI NVTKSTRVGV RLYGTFDDYN GPIDEGAALF RKVMRTVPTL
FPARYTPDAA NSATKHTLFG NSLNGDNFYI NPYADMVSGY KDKSKSLMLA QFELTQNLSF
ITEGLSINAL GNTNKEASFD VKREYNPFFY SVSAYNKFDD SFVLRELNSN SGTETLDYSE
GTKVVKSNTT LQTALTYNRI FQAKHSVSAL LNFKVLGSIE ANANTLQKSL PSRSADLAGR
ATYSFNNRYF AEFNFGYNGS ERFYETQRFG FFPSAGIAWA VSEEKFMAPV KKVLSKLKLR
GTYGLVGNGD IGSSDDRFFY LSNISYNGPT TSFGTDYSYG RTGVNVTRYE NRDITFERSK
KLNIGLDLGL FNKFDLQADY FTEQRTGILQ TRASLPKSLG LTAAVRANVG AASASGIDIS
SSYSQFFGTN FSIQALGNFT YATSKYEVYE EPIYAEKNLS RVGYPIRQTW GYIAERLFVD
EADVANSPIQ TFGTYSAGDI KYKDVNGDGQ VTTRDRVPIG YPTVPEITYG FGFSSTFKSF
DLACFFQGSA RSSFWMNTNG STSPFAPYFY AGESNVTGVP RNQLLKVYAD SHWSEENRDI
YALYPRLSTQ VLENNNQTST WFMRNGAFLR VKSVLLGYTL PKKLTKKLLM ESVRFYAEGT
NLGALSKFKT WDVEMGSDGL GYPLQRVYNF GLQVSF
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