Gene Phep_2297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2297 
Symbol 
ID8253403 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2668266 
End bp2669459 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content41% 
IMG OID644935946 
Producthypothetical protein 
Protein accessionYP_003092563 
Protein GI255532191 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value0.0263898 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAA CCAAATATTT TTTTGCAATC GCGCTTATTT TACTCGCATT TGCTGGATGT 
AAAGAAGATG ACCTAGGACC TTTGTCTAAG AAGGGGTCAA TGCCTCAGAA GGTGAGCAAT
GTAACGGTGA AAGCTCGTCC GGGAGGAGCA AAATTTAGCT ACAACGTTCC TGATGATGAC
GATTTGTTAT ATGTTAAAGC GGTATATGAA ACATCTCCAG GTCACGTTCG GGAGGTAAAG
GCATCTGTGT ATGTCGATAG TCTTATCATC GTCGGTTTTG GAGATACAAA ACCTCATGAA
GTTAAACTTT ATGCCGTTAG TCGTTCCGAA ATTCAATCAG AACCCGAAAT AGTCATGGTT
ACACCGCTTA CCGCTCCCGT AAAACTTGTC AGAGAATCGC TAAGTATGAC AGCAGATTTT
GGAGGAGTTA CTGTTTCATT CCTGAATGAG CTTGGGGCAA ATATCGCAAT CAACGTAATT
GTTAAGGATG CAACTGGAGA TTGGGTAACA CTTGAGACAT TTTATACAGA CCAAAAGACG
GGCCAGTATT CGGCCCGAGG GCAGGCATCG GCTCCCGCAG AATTCGGTGT ATTTATACGG
GATAGGTACA GTAATTATTC TGATACGCTG AAAGCCACGC TGACTCCAAT TTTTGAAAAG
CAATTGGCTT CGCCCGCCAT CGTAAAAATT TTAGCCAGTG ATAAATGGAG AACGGCAGAT
TTTTATATGG GATATGTTTG GGAAAGAATG TTTGACAAGG TTGTTGATAA AAGTTCTACC
AATATGGCTC ATACAAATGT TGGAACTGTT TTTCCGGTAT CGTTCACTTT AGATTTTGGA
GTTGCATCGA AATTCAGCCG TTTCAAGTAC TGGATGCGCG GACTAACTGC CGGCGAAAAT
CAAACTTACT TGTACAATTC AGGAAATCCG GAAATATTTG AGCTCTACGG AAGTAATGTT
TTAGACGATA ATTTTGCAAA CTGGACAAGG ATTGCCGAGT ATAAAATTGA GAAACCATCA
GGTTTGCCAC TAGGAACAAG TTCGAATGCT GATATAGCTA CGGCTGCTGC AGGCCTAGAT
TTAACTTTTC CATCAAATAC TCCTGCTTTT AGATATATCC GTTGGAAAAC AACTAAGAAT
TTCGGAACCG TAAATTATAT TCACATAGCG GAATTAGCTT TTTTTGGTCA ATAA
 
Protein sequence
MKITKYFFAI ALILLAFAGC KEDDLGPLSK KGSMPQKVSN VTVKARPGGA KFSYNVPDDD 
DLLYVKAVYE TSPGHVREVK ASVYVDSLII VGFGDTKPHE VKLYAVSRSE IQSEPEIVMV
TPLTAPVKLV RESLSMTADF GGVTVSFLNE LGANIAINVI VKDATGDWVT LETFYTDQKT
GQYSARGQAS APAEFGVFIR DRYSNYSDTL KATLTPIFEK QLASPAIVKI LASDKWRTAD
FYMGYVWERM FDKVVDKSST NMAHTNVGTV FPVSFTLDFG VASKFSRFKY WMRGLTAGEN
QTYLYNSGNP EIFELYGSNV LDDNFANWTR IAEYKIEKPS GLPLGTSSNA DIATAAAGLD
LTFPSNTPAF RYIRWKTTKN FGTVNYIHIA ELAFFGQ