Gene Phep_2282 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2282 
Symbol 
ID8253388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2650683 
End bp2652305 
Gene Length1623 bp 
Protein Length540 aa 
Translation table11 
GC content39% 
IMG OID644935931 
ProductRagB/SusD domain protein 
Protein accessionYP_003092548 
Protein GI255532176 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00108991 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGAAAAAAA TAATTCTTTT AAGTTTTTTG GCAATTATAT GCTCAACAAC TGGTTGCAAG 
AAATTTTTAG ATAAAGTACC CTCATCATTT GTTGCCCCCG AAAATTATTT TAATAATGAA
AAAGAAGTAA ATACTGCATT GAACGGAGTG TATGATATTT TAAGCCGGGA GCAGACATTT
GGCGGACAAT TGCCCATTCG CCATGCAGTC AGTACAGATG AGTCATTCTT CTCTTATGCT
TCCTTTCCAA CCGGACCTTT CTATTATAAT TTTGGTGCCG ATGATGCTAC GATACGGGAT
CTATGGAGAT ACCTGTATGA TGGCATAGAA CGGGCAAACG TTTTACTGGC CAATCTGGAT
AAAGCAAATA TGGACGAGGG CAAAAAATCT GTTGTTAAAG GTGAAACTCT CTTTCTGCGG
GCCTTTTATT ATTTTATCCT GGTACAGAAT TGGGGTGGTG TACCTTTAAA GCTGACACCA
ACCACCTCTA TAAACAATGT TAATATTCCA CGTAATTCTG TTAAGGAGGT TTATGATCAG
ATTCTAAAAG ATATGGTTGA AGCGGAAGGA TTGGTCAAAA AGATTTCTGA TATCGGTTTC
GGAGGAAGGG TCTCTAAATC CGCTGTACGT GGTATTTTGG CCAGAGTGTG CCTTAACATG
GCTGGTTATC CCTTAAATGA CGTTGCTAAA TTTAAAGATG CTGCTACATG GGCTGCAAAA
GTGAATGAAT ATGGAGAACA TGCTTTAAAT CCAGATTACA GCCAGGTTTT TATAAACCTT
TGTAAAGATC AGTACGATAT AAAGGAAAGC ATTTTTGAAG CTGAATTATA CGGATCAAAT
AGTGACGCTT TTAGAGAAGG TGGACGGATC GGCAACGAGA ACGGTGTGAA ATGCTCTGCA
TCTACAGATT TGATCCCTAC AGTTGGTTTT GCTTACGGCT TTGTAAGCAC AACCAGAAAG
CTATACACGT CTTATGAATA TAATGCCACT GATGCATCTA AACGTGACCT TAGAAGAGAT
TGGGCAATAG CTACCTATAC ATTAAATGCA TCCGGTGTAA AGGCGAATAT TGCCGCTACC
AATATTTATG CAAGAAATTG TGCTAAATGG CGCCGTGAAT ACGAAGTGGT AACACCTAAA
AATAAAAACT ATACGTCAAC CAATTTCCAG ATACTCAGAT ATGCTGATGT ATTACTGATG
CTGGCCGAAG CAGAAAATGA AGTAAATAAC GGGCCAAATG CCACTGCGGT TAATGCCCTT
AACGAAGTAA GAAGACGTGG TTACGGCAAA TTATTAGCAG GGGCAACCAA TCCGGCTAAT
GCCGATTATC CGGGGGCAAT TTCACTAAGT AAAGCTGCAT TTTTAAAAGT GATACAGGAT
GAAAGGGCAC GTGAACTGTG TTTTGAAGGT TTACGCAAGT CTGATCTGAT CAGGTGGGGA
ATATTTGTAA ATACCATGCA AGCCACCGCT ACCGAGTTTA CTACTTATGC TGCCATGACC
ACTACCATTT ATAAAAATGC AAGGGATGCT GCACAAAGGG TTACTGCAAC ACATTTGTTG
TACCCAATTC CAATTCTGGA AATGTCGTTA AACAAAGCTA TGGTACAAAA TGAAGGATAT
TAA
 
Protein sequence
MKKIILLSFL AIICSTTGCK KFLDKVPSSF VAPENYFNNE KEVNTALNGV YDILSREQTF 
GGQLPIRHAV STDESFFSYA SFPTGPFYYN FGADDATIRD LWRYLYDGIE RANVLLANLD
KANMDEGKKS VVKGETLFLR AFYYFILVQN WGGVPLKLTP TTSINNVNIP RNSVKEVYDQ
ILKDMVEAEG LVKKISDIGF GGRVSKSAVR GILARVCLNM AGYPLNDVAK FKDAATWAAK
VNEYGEHALN PDYSQVFINL CKDQYDIKES IFEAELYGSN SDAFREGGRI GNENGVKCSA
STDLIPTVGF AYGFVSTTRK LYTSYEYNAT DASKRDLRRD WAIATYTLNA SGVKANIAAT
NIYARNCAKW RREYEVVTPK NKNYTSTNFQ ILRYADVLLM LAEAENEVNN GPNATAVNAL
NEVRRRGYGK LLAGATNPAN ADYPGAISLS KAAFLKVIQD ERARELCFEG LRKSDLIRWG
IFVNTMQATA TEFTTYAAMT TTIYKNARDA AQRVTATHLL YPIPILEMSL NKAMVQNEGY