| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2280 |
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| Symbol | |
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| ID | 8253386 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2647807 |
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| End bp | 2650206 |
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| Gene Length | 2400 bp |
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| Protein Length | 799 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644935929 |
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| Product | glycoside hydrolase family 3 domain protein |
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| Protein accession | YP_003092546 |
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| Protein GI | 255532174 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1472] Beta-glucosidase-related glycosidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.00208598 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGCAGAACC GTTCAATCAG CAACTTACCC ATACTTATTG TTGTTGTTAG CCTCACAACG
CTCATCTCAT CTTTTAAGGC CGATCCACCA ATTTATCGCA AAGGCTGGAT CGATCTGAAT
AAAAATGGAA AAAAGGATAT TTATGAAGAT CCGCTCCAAC CTTTAAATGC AAGAATAGAC
AACCTGCTGT CGCAAATGAC ACTGGAAGAG AAAACCTGTC AGATGGCCAC TCTATATGGC
TGGAAACGTG TATTGAAAGA CTCTTTACCT ACAAAAGAAT GGAAAACGGC AATATGGAAA
GATGGGATTG CAAATATTGA CGAACATTTG AACGGCTTTC TAACCTGGGG TGTAACCAGT
ACCTCAGAAC TGGTAACTGA TATTAAAAAA CATGTATGGG CTATGAATGA AACGCAGCGT
TTTTTTATAG AGCAAACCCG TTTAGGAATA CCAGTAGATT TTACCAATGA GGGGATAAGA
GGGGTGGAAG CTTACGAGGC CACAGGTTTC CCTACCCAGT TAAACATGGG TATGACCTGG
AACAGGAACC TGATCAGGAA AATGGGTAGA ATCACCGGCC AGGAAGCAAG GGCATTGGGT
TATACCAATG TGTATGCCCC CATACTTGAT GTGGCAAGGG ACCAGAGATG GGGAAGACTG
GAAGAAGTAT ATGGTGAAGA TCCTTACCTG GTGGCCCGTC TAGGTGTAGA AATGACCCTG
GGTATGCAGG AGAATAACCA GATTGCCTCA ACAGCTAAGC ATTTTGCAGT ATATAGTGCC
AACAAAGGAG CAAGAGAGGG ACTTGCCAGA ACAGATCCTC AGGTTTCACC CCGTGAAGTA
GAAGACATCA TGCTTTATCC TTTTAAAAAA GTGATACAGG AAGCCGGAAT AATGGGGGTG
ATGAGTTCCT ATAATGATTA CAATGGCATT CCCATTACCG GAAGTGAATA CTGGCTAACA
CAACGCTTAA GAAAGGATTT TGGTTTTGGT GGATATGTGG TAAGTGACAG CGATGCACTT
GAATATTTAT ACAATAAGCA TCATGTTGCA GCCAATTTAA AAGAAGCCGT TTTTCAGGCT
TTTATGGCTG GATTAAATGT GCGAACTACC TTTCGGCCAC CAGATAGCAT CATTATTTAT
GCGCGGCAAC TGGTTAATGA GGGACGCATC CCCATAGAAA CAATTAACAG CAGGGTTAAA
GATGTTTTGC GGGTAAAGTT TAAGCTAGGC CTGTTTGACC AGCCTTACGT AAAAGATGCA
GCAGCATCAG AAAAACTGGT AAACAGTATC GCCCATCAGG CAGTTGCCTT ACAGGCATCT
AAAGAAAGTA TTGTGCTGTT AAAGAACAAT AATCAAATCC TGCCACTTTC AAGATCCTTA
AAAAAGATTG CTGTAATAGG GCCAAATGCT GCCGACAATG ATTACGCACA TACGCATTAC
GGCCCGCTTC AATCTAAAAG TACAAACATA CTGGAAGGTA TCCGTAATAA AATTGGAGCA
GATAAGGTAT GGTATGCCAA GGGCTGCGAG CTGGTAGACA AGAACTGGCC GGAAAGCGAG
ATTTTTCCGG AAGATCCTGA TGCAACAGCT ATAGCCCTGA TTGAAGATGC TGTTAACACA
GCTATGAAAG CAGACGTAGC AATAGTAGTT TTAGGGGGCA ATACCAAAAC AGCAGGCGAA
AACAAAAGCC GCACAACACT TGAACTTCCT GGTTTCCAGT TAAACCTCAT CAAAGCCATT
CAAAAAACTG GAAAACCGGT TGTTGCCGTA ATGATAGGTA CACAACCTAT GGGCATAAAT
TGGATAGATA AATATATCGA CGGTATAGTA TATGCAGGAT ATCCTGGCGT AAAAGGAGGA
ATTGCAGTTG CTGATGTTTT ATTTGGTGAT TATAACCCTG GGGGCAAGTT AACACTTACT
TTTCCCAAAT CTGTAGGGCA GCTGCCTTTA AATTTTCCCT CTAAACCTAA TGCACAAACT
GATGAGGGTG AACTGGCTAA AATTAAAGGT TTACTGTATC CATTCGGTTT TGGCCTAAGT
TATACAACGT TTGCTTATAG CAATCTAAAG ATCAGTCCAA TTGAACAGGA AAAAGACGGC
AACATCAGTA TCAGTGTAGA CATTACCAAT ACTGCAAAGC TTGAAGGTGA TGAAATAGTG
CAGTTATACA TCAGGGATGT ATTGAGTACG GTAACCACCT ATGAAAAGAT ATTAAGAGGA
TTTGAAAGGA TCAGCTTAAA ACCAAATGAG ACCAAAACCC TTAAGTTTAC TTTGTTTCCT
GATGATCTGA AATTATGGAA CCGCGAGATG CAGCACGTAA TTGAACCCGG AACTTTTAAG
GTGATGATTG GTGCCTCAAG TGAAGACATA AGATTAACAG GAAGTTTTAA TATCAAATAA
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| Protein sequence | MQNRSISNLP ILIVVVSLTT LISSFKADPP IYRKGWIDLN KNGKKDIYED PLQPLNARID
NLLSQMTLEE KTCQMATLYG WKRVLKDSLP TKEWKTAIWK DGIANIDEHL NGFLTWGVTS
TSELVTDIKK HVWAMNETQR FFIEQTRLGI PVDFTNEGIR GVEAYEATGF PTQLNMGMTW
NRNLIRKMGR ITGQEARALG YTNVYAPILD VARDQRWGRL EEVYGEDPYL VARLGVEMTL
GMQENNQIAS TAKHFAVYSA NKGAREGLAR TDPQVSPREV EDIMLYPFKK VIQEAGIMGV
MSSYNDYNGI PITGSEYWLT QRLRKDFGFG GYVVSDSDAL EYLYNKHHVA ANLKEAVFQA
FMAGLNVRTT FRPPDSIIIY ARQLVNEGRI PIETINSRVK DVLRVKFKLG LFDQPYVKDA
AASEKLVNSI AHQAVALQAS KESIVLLKNN NQILPLSRSL KKIAVIGPNA ADNDYAHTHY
GPLQSKSTNI LEGIRNKIGA DKVWYAKGCE LVDKNWPESE IFPEDPDATA IALIEDAVNT
AMKADVAIVV LGGNTKTAGE NKSRTTLELP GFQLNLIKAI QKTGKPVVAV MIGTQPMGIN
WIDKYIDGIV YAGYPGVKGG IAVADVLFGD YNPGGKLTLT FPKSVGQLPL NFPSKPNAQT
DEGELAKIKG LLYPFGFGLS YTTFAYSNLK ISPIEQEKDG NISISVDITN TAKLEGDEIV
QLYIRDVLST VTTYEKILRG FERISLKPNE TKTLKFTLFP DDLKLWNREM QHVIEPGTFK
VMIGASSEDI RLTGSFNIK
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