Gene Phep_2275 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2275 
Symbol 
ID8253381 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2643160 
End bp2644353 
Gene Length1194 bp 
Protein Length397 aa 
Translation table11 
GC content42% 
IMG OID644935924 
Producttrans-2-enoyl-CoA reductase 
Protein accessionYP_003092541 
Protein GI255532169 
COG category[S] Function unknown 
COG ID[COG3007] Uncharacterized paraquat-inducible protein B 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.00154098 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGATTATTG AGCCTAGAAT GCGTGGGTTT ATATGCCTTA CAGCACACCC GAAAGGATGT 
GAACAAAATG TAATCAACCA AATTAATTAT GTAAAATCTA AAGGGCCAAT TGATGGCCCT
AAGAAAGTAT TGGTCATAGG AGCTTCTACA GGATTCGGAC TGGCTTCCCG GATCACCAGT
GCATTTGGTT CAGACGCGGC TACAGTAGGT GTTTTTTTTG AAAAACCGCC GGCCCCTGGT
AAAACAGCGT CACCAGGCTG GTACAACAGC GCCGCCTTTG AAAATCAGGC ACTAAAAGCA
GGTTTATATG CCAAAAGCAT TAACGGAGAT GCTTTTTCTG ATGAAGTAAA ACAAAAAACG
CTGGATCTGA TTGAAAAAGA TTTAGGGCAA ATAGACCTGG TTATTTATAG CCTTGCTTCT
CCAAAAAGGA TGCACCCTAA AACCGGCGTG TTACATAGTT CTGTGCTAAA GCCGATTGGT
GAGGATATAT TTACCAATAA AACTGTAGAT TTTCATACGG GGGTAGTTTC TGAAATTTCC
ATTGTTCCGG CTAATGAAGA AGAAATAGAA AATACAATTG CCGTAATGGG TGGTGAAGAC
TGGGAAATGT GGATGGATGC ATTGAAATCC AGAGGTTTGC TCGCAACAGG AGCTAAAACA
GTTGCCTATT CATATATTGG TCCATCTGTA ACTGAGGCGG TATATCGTAA AGGTACCATT
GGCCGTGCGA AAGATCACCT GGAAGCGACT GCGTTTACCA TCAACGATAA ATTAAAAGAC
ATCGACGGAA GGGCTTTTGT CTCTGTAAAT AAGGCTTTGG TTACACAGGC AAGTTCTGCG
ATACCTGTAA TTCCACTTTA TATCTCCCTT CTTTATAAAG TAATGAAAGA AAAAGGCATT
CATGAAGGCT GCATAGAACA GATGGAAAGG CTATTTACCG AAAGGCTCTA TACCGGACAT
GAGCCCAAAA CTGATGAGCA GGGTAGGATC AGAATAGATG ATTGGGAAAT GCGTAGCGAT
GTTCAGGATA AGGTATTTAC CTTATGGGCA GAAGCAACCG ATGAAACCCT GCCATTGATA
GGTGATCTGC CGGGTTATAA AAAAGATTTC CTGAATTTAT TCGGCTTCGA TATGGCTGGT
GTCGACTATC AAAAAGAAGT TGATGAAATG GTAGAAATAC CAGGGCTGGT ATAG
 
Protein sequence
MIIEPRMRGF ICLTAHPKGC EQNVINQINY VKSKGPIDGP KKVLVIGAST GFGLASRITS 
AFGSDAATVG VFFEKPPAPG KTASPGWYNS AAFENQALKA GLYAKSINGD AFSDEVKQKT
LDLIEKDLGQ IDLVIYSLAS PKRMHPKTGV LHSSVLKPIG EDIFTNKTVD FHTGVVSEIS
IVPANEEEIE NTIAVMGGED WEMWMDALKS RGLLATGAKT VAYSYIGPSV TEAVYRKGTI
GRAKDHLEAT AFTINDKLKD IDGRAFVSVN KALVTQASSA IPVIPLYISL LYKVMKEKGI
HEGCIEQMER LFTERLYTGH EPKTDEQGRI RIDDWEMRSD VQDKVFTLWA EATDETLPLI
GDLPGYKKDF LNLFGFDMAG VDYQKEVDEM VEIPGLV