Gene Phep_2273 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2273 
Symbol 
ID8253379 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2641492 
End bp2642295 
Gene Length804 bp 
Protein Length267 aa 
Translation table11 
GC content38% 
IMG OID644935922 
Producthypothetical protein 
Protein accessionYP_003092539 
Protein GI255532167 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value0.000548322 
Fosmid HitchhikerNo 
Fosmid clonabilitydecreased coverage 
 

Sequence

Gene sequence
ATGCATTTAA AAGACACATT ATTAAAATAT GCTTTCCTGC TTGTTATTTA TTGTGCAGGA 
GGGATTTCTC TAGGCTATGC CCAGGAAAAA ACGGTTTTAC TTGATTATTT CTTTAACCAT
GAAGTAAAAA AGGACAAATC GGGAAAAGAA GTAAGGTTCC ATTATACCTG GGAGGATCAG
ACCCTGAACG GTTTTTCTAT GCTAGGGGAT CTGTTCATAA AGGAAGGATT AAAGATAAAA
AGCCTGGATG CCGCCCCTAC TGCATCTAAT CTTAAAGGAA ATGATATCTA TATTATAGTC
GATCCGGACA ATCAAAAAGA AAGTCCCAAT CCAAACCTTA TTGGCCCCGG TCATATCAAG
GCAATAACAG ATTGGGTAAA GGCCGGTGGC GTGCTTGTAA TCTTTGCCAA CGATAGCGCA
AATACCAATC TAATACAGTT AAATGACCTT TCTAAAAAGT TTGGAATAAC TTTTACCAAT
CAAAGCAGGA ATATGGTGAA AAATGGAAAA CTTGAAATGG GCGAAGTAAA TGTTCCAAAT
GACAATACGG TTTTTCCTTC TTCGAAGAAG TTTTATTTAA AGGAGATCTC TGTTCTTGGC
GTTAGGCCAC CTGCAAAAGC CTTAATTACG GAGCAAAATG ATGTTATAAT GGCAACCGCC
AGATATGGAA AAGGAACAGT ATTTGCCGTT GGAGATCCAT GGTTATACAA TGAATATGTA
GATGGAACCA GGATCCCTGC AGAGTATGAA AATTATAAAG GCGCTGCTGA ACTGGTAAAA
TGGCTGAAAA AGCAGATTCC TTAA
 
Protein sequence
MHLKDTLLKY AFLLVIYCAG GISLGYAQEK TVLLDYFFNH EVKKDKSGKE VRFHYTWEDQ 
TLNGFSMLGD LFIKEGLKIK SLDAAPTASN LKGNDIYIIV DPDNQKESPN PNLIGPGHIK
AITDWVKAGG VLVIFANDSA NTNLIQLNDL SKKFGITFTN QSRNMVKNGK LEMGEVNVPN
DNTVFPSSKK FYLKEISVLG VRPPAKALIT EQNDVIMATA RYGKGTVFAV GDPWLYNEYV
DGTRIPAEYE NYKGAAELVK WLKKQIP