| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2261 |
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| Symbol | |
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| ID | 8253367 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2629401 |
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| End bp | 2630447 |
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| Gene Length | 1047 bp |
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| Protein Length | 348 aa |
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| Translation table | 11 |
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| GC content | 39% |
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| IMG OID | 644935910 |
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| Product | periplasmic binding protein/LacI transcriptional regulator |
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| Protein accession | YP_003092527 |
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| Protein GI | 255532155 |
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| COG category | [K] Transcription |
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| COG ID | [COG1609] Transcriptional regulators |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 20 |
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| Fosmid unclonability p-value | 0.276208 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCATGA ACAACAGCGT CACATTAAGA GATATTGCCA AAGCGCTTAA TTTATCTATT
TCTACAATTT CGAAGGCTTT AAATGATAGT CATGAAATCG GTGCAGAAAC TAAGCAAAAG
GTTTTAGACT ATGCAAAGAA ACACCATTAC TCGCCCAATA GAATGGCAAA AGGGCTTAAA
GAAGGTAAAA GCCGGTCTAT AGGTGTTGTG GTCTGCTCTT TAGACAATAA CGTTATTTCC
CAAATGCTGG ATGGGATCCA TAAAGCTGCA ACGGATAAAG CCTATCAGAT CATTATTATG
CAAAGTAAGG AATCTGAAAG ACTGGAAAGT GCTTGTATAG AATTGCTATA TGCGGGAGGT
GTAGATGGAA TCCTGATTTC TCCGGCATAT GAAACTATAA ACTTCAGTTA CCTTATTGCC
CTTCAGGAAT CAGGTTTGCC CATCGTGTTA TTTGACCGGC TGATTGATCA GGTCAATACC
CATAAAGTTG GAGCAGATAA CTTTAAAGGT GCTTATGATG CAACGATGCA CCTGATCAAC
AACGGATACA AAAATATTGC TCATTTAAAT ACGAATACCA TATTGAGTAT AGCTACCGAT
CGTTTAAACG GATATAAACA GGCACTTGCA GATAGTGGTA TTAAATACAG ACCGGAATTA
TTGCGGTCAT GTAATTATAC AGATGCAAAT AAGTTAAATG AAGATTTAGA GCAGGCTATT
AAATATTACA TGAGCCTGAA GGATAAACCT GACGCTATAT TTACAGCTAC GGACCAGATC
AGTACCAGGT GTTTGGTCCT GCTCAATAAG CTGGGCTATA AAATTCCCGA TGATGTTGCT
TTAATTGGCT TTACCAATAC TGAGCTTGCT GATGCGATGA ACCCCGCTTT AAGTACAGTA
CATCAGCCAG CTTTCGAGAT TGGCCAGCTT GCAGCTGAAA AATTACTGGC CCTGATTGAA
AAGAAGGACC TGAATGAAGG CTATGAAACT GTTATGCTGC CAACACAGAT CAAGGTGAGG
GCATCATCTC AATCTAAAAT CAGGTAA
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| Protein sequence | MSMNNSVTLR DIAKALNLSI STISKALNDS HEIGAETKQK VLDYAKKHHY SPNRMAKGLK
EGKSRSIGVV VCSLDNNVIS QMLDGIHKAA TDKAYQIIIM QSKESERLES ACIELLYAGG
VDGILISPAY ETINFSYLIA LQESGLPIVL FDRLIDQVNT HKVGADNFKG AYDATMHLIN
NGYKNIAHLN TNTILSIATD RLNGYKQALA DSGIKYRPEL LRSCNYTDAN KLNEDLEQAI
KYYMSLKDKP DAIFTATDQI STRCLVLLNK LGYKIPDDVA LIGFTNTELA DAMNPALSTV
HQPAFEIGQL AAEKLLALIE KKDLNEGYET VMLPTQIKVR ASSQSKIR
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