| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2259 |
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| Symbol | |
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| ID | 8253365 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2627229 |
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| End bp | 2628422 |
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| Gene Length | 1194 bp |
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| Protein Length | 397 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 644935908 |
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| Product | efflux transporter, RND family, MFP subunit |
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| Protein accession | YP_003092525 |
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| Protein GI | 255532153 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0845] Membrane-fusion protein |
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| TIGRFAM ID | [TIGR01730] RND family efflux transporter, MFP subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.141283 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 21 |
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| Fosmid unclonability p-value | 0.411522 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAATAATA ACCTCTTTTA CCCCTCGCAA CTTAACACCG TTAAATTATC TATACACGTT
ATGAAGACAA CTATATTACT TGCAGCACTA TTTCTAATGG GCTGTGCAGA TAAAACTCCT
CAGGCCGCTG CACCTGCTCC ACCAGCCTTA CCTGTGGCAA GTATTACCAC AGGATCAGAA
ACTACTTTCC AGGATTATCC CGCATCCATA GAGGGTACAG TCAATGTCGA AATCAGGCCA
CAGGTTAGTG GTACACTTGA AAAAGTATAT ATTGATGAAG GCGCTTTTGT AAATTCAGGT
CAGCCAATTT TTAAAATCAA TGAACAGCCT TACAGAGCTG CTTTAAATAA TGCGCTTGCC
AGTCAACATT CTGCAGAAGC TTCATTAATT AATGCCCAGC TCGAGGTTGA GCGATTAACA
CCCTTAGTTC AGAATAAGGT AATCTCAGAG TTTCAGCTAA AATCAGCCAA AGCCACTGCA
CAGGTTGCTA AAGCAAACAT CGAGCAGGCG AAGGCTAATG TGGCCACAGC ATCAATAAAC
TTAGGATATA CTTTAATCAA AGCACCGGTG AGCGGATATA TTGGCCGTCT CCTTAAAAAA
CAGGGAAGCT TAGTCACAGC AACAGACGCT GAAGCATTGA CAAATTTGTC GGATGTTCAT
GATGTACATG TATACTTCGC GTTAGGGGAG AAAGATTTTG TGAATTTCAA AGATCAGTAT
CCGGGGCAGA CTTTGAATGA GAAAATCAAA CAGCTTCCTG CGGTAAAGTT AATTCTGGCC
GACAATACTG AATATGCCAG ATCAGGAAAA ATTGATGTGA TCGACGGACA ATTTGATAAA
ACAACAGGGG CCATTACAGT GCGGGCTAAA TTTCCAAATC CGGATGGACT GCTCAGATCT
GGAAATACCG GAAAAATAAG ATTGAGCCTT CAACACAATA ATGCGTTAGT TGTACCGCAG
GTGGCCACAA TTGAAGTGCA GGACAAAGTA TTTGTATTTG CACTTGCAGA TAGTAATAAG
GTAAAAAAAC AAGCCATAAC CATTATTGGT AAAGCAGGAA ACAATTATCT GGTTAAAGAT
GGAATAAAAG CCGGCGACCA GATCGTCTTG AGTGGATTAG ACCGTTTGCA GGAGGGAGTT
GTAATTGCAC CACAAAAAGC GACAGATAAG GTTGTTGCTA TAACAAAAAA ATAA
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| Protein sequence | MNNNLFYPSQ LNTVKLSIHV MKTTILLAAL FLMGCADKTP QAAAPAPPAL PVASITTGSE
TTFQDYPASI EGTVNVEIRP QVSGTLEKVY IDEGAFVNSG QPIFKINEQP YRAALNNALA
SQHSAEASLI NAQLEVERLT PLVQNKVISE FQLKSAKATA QVAKANIEQA KANVATASIN
LGYTLIKAPV SGYIGRLLKK QGSLVTATDA EALTNLSDVH DVHVYFALGE KDFVNFKDQY
PGQTLNEKIK QLPAVKLILA DNTEYARSGK IDVIDGQFDK TTGAITVRAK FPNPDGLLRS
GNTGKIRLSL QHNNALVVPQ VATIEVQDKV FVFALADSNK VKKQAITIIG KAGNNYLVKD
GIKAGDQIVL SGLDRLQEGV VIAPQKATDK VVAITKK
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