Gene Phep_2250 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2250 
Symbol 
ID8253356 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2615235 
End bp2616419 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content41% 
IMG OID644935899 
ProductFecR protein 
Protein accessionYP_003092516 
Protein GI255532144 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAGC AGGAAAGAAT ATCCTTTTTA TTAGACCGTT ACATCCACAA CAATTGTACA 
GCAGGTGAAC TTGACGAGTT GTTTCAACTT TTAGATCATC ACAGCAATAA CGATTTTTTA
CAAAGGGAAC TGAAACTCCT GTGGCAGCAT ACCGGCCCCG AGCAACACCA TACCAACGCA
CAATGGGAGC AGCTCTACAA TTCTATGATG CATAAAACGC AAAGAAAACC AAAGGTCAAA
TCTAAATGGC CTTATCAAAA ATTAGCTGCT GCAGCATCAG TAATCCTCCT GCTGTTTGCC
GGAATATTTT TCTATTCTCA GTATCAAAAT ACACAGCATA AAACAATAAA TAAACAGATC
CATGCAAAAA ATGAACTGTT ACCTGGTACC AACAAAGCTA TACTTACACT GGCCAACGGA
ACCAGGGTGC CACTTGATGA TGTCCTTAAC GGAAAAGTGT CAACACAGGC TGGTGTTCAG
CTCACCAAAA CAGCATCCGG TCAACTGATA TATCACATTC AACAGCAAGC TGCCACATCA
AAATTAAGTT TCAATACCAT AGAAACCCCA CGTGGGGGAC AATATCAGCT CATTCTTTCC
GATGGCACCA GAGTCTGGCT AAATGCAAAT TCCTCACTGA AATACCCCAT TTCCTTCAGT
AAAACAGAGC GGCTGATCGA ACTTAAAGGC GAAGCATATT TTGAAGTTAC CAAAAACAAA
AACGCACCTT TTAAAGTAAT CAGCAATAAC CAGGTACTGG AAGTATTGGG TACACACTTC
AACATCAATG GTTATGAAGA TGAGCCGGAT ATCAAAACTA CGCTGATTGA AGGCTCAGTT
AAAGTATCAA ACCTGTCTAA CCATACCCAG GCCCTTCTTA AACCCGGACA GCAATCCAGT
TTCCATACCA ATAGGTTTGA AATAAGCAAG GTAGATACTG AGGCCGCAAT AGCATGGAAA
AACGGCTATT TCACATTTGA TAAAACTACC CTTGAAACCA TAATGCGGCA GGTTTCAAGA
TGGTACGATG TAGAGGTTAC CTATCAGAAC AAGACAGTTA AAGATCAGGT TTTCAGTGGA
AATGTCTCCC GATTCGAAAA TGCTGCCCAG GTATTGGCCA TTCTGGAACT TACCGGTCTG
GTCCACTTTA AAGTAGAAGG AAGGAGGATT ACGGCCATGT TGTAA
 
Protein sequence
MNKQERISFL LDRYIHNNCT AGELDELFQL LDHHSNNDFL QRELKLLWQH TGPEQHHTNA 
QWEQLYNSMM HKTQRKPKVK SKWPYQKLAA AASVILLLFA GIFFYSQYQN TQHKTINKQI
HAKNELLPGT NKAILTLANG TRVPLDDVLN GKVSTQAGVQ LTKTASGQLI YHIQQQAATS
KLSFNTIETP RGGQYQLILS DGTRVWLNAN SSLKYPISFS KTERLIELKG EAYFEVTKNK
NAPFKVISNN QVLEVLGTHF NINGYEDEPD IKTTLIEGSV KVSNLSNHTQ ALLKPGQQSS
FHTNRFEISK VDTEAAIAWK NGYFTFDKTT LETIMRQVSR WYDVEVTYQN KTVKDQVFSG
NVSRFENAAQ VLAILELTGL VHFKVEGRRI TAML