Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2248 |
Symbol | |
ID | 8253354 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2609745 |
End bp | 2611535 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 644935897 |
Product | RagB/SusD domain protein |
Protein accession | YP_003092514 |
Protein GI | 255532142 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATTATA TAAACACGAT AATCAATTTA TCCAATCATA AAATGATCAT GAAAAGAATT ATTTTTATTG CCACAATAGT GCTGCTGGCA GGCTGTAAAA AGTCGTTCGA ACTTTATCCG CCTGATAAGC TTGCCCCCGC AAATGCGTTC AAAACAGAAA AAGACCTGCA GTTATACGCC AATTCATTTT ACAATGCCCT GCCTACAGGT AATGATATAG TAAGGGCTGA TGGCACCAGC GACTTTCTGG CCGGCTCTAC CGTTCCGGCC TATATTGCCG GTAGTTACAA TGCCGTTCAG GCACCTGCAG CAACCTGGTC CTTTACTTCA TTAAGGAACA TCAATTACTT CCTGGAACAC TTCGGACAGG CCAGTATTCC CGATGAAGCC AAAAACCACT TCGAAGGTCT GGCCCGGTTT TTCAGGGCAT GGTTTTATTT TGATAAGGTA AAACAGTTTG GCGATGTGCC CTGGTATGAT AAAACCATGG ACGTATCAGA TCCTGACATT TACAAACCAA GAGATCCCAG GGATTTTGTA ATGAAAAAGG TGCTGGCCGA TCTGGATTTT GCTGCCGCCA ATATCAGGGC TGCTAAAGAT GCCTCATCTT CCCAAATCAA CAAATGGGTT GCACTGGCCT TTAAGTCGAG GGTATGCCTT TACGAAGGTA CTTTCCGCAA ATACCATACA GAATACAGCT TTACAGATGC CAGTTTCTGG CTGGAACAGA GTGCTGATGC AGCCTCAAAA GTAATGCTGG GAAACCAGTA TCAGATCAAT AAGGAAGCTA CATTGAACAT GAGCTACCGC AACCTGTTCA TCAATGAACT GCCTAAAACG AATGAAGTGA TGCTGGCAGC AGTAAACAGT TTGACGTTAA GGGTACTTAA TGATGCCAAC TGGTACTGGA CAAGTGCTAC TTACGGCAGA AGACTGAGCT TTACAAAATC CTTTATCAAT ACCTTTTTAA AGGCCGATGG CAGCCGTTTT ACCGATCAGA CCGGTTACAA TGCCATACCA TTCTGGAATG AGGTAAAAGG CAGGGACCTG AGGTTGCAGC AAACCATTAG AATGGGCGAT TACAAAAGGG AAGGGGCCGC TGCACCACCC GATTTCACTT ATACCTATAC GGGTTATATG CCCTATAAGT TTACCCTGGA TGCTAAAACT ACCGATGGTA AGGCCGAGAA CAGCAATTCA CTACCCATCA TCCGCTACGC GGAAGTGTTG CTGAATTTTG CTGAGGCAAA GGCAGAACTG GGCACTTTTA CGGTTACCGA TTGGAACTCA ACCATTAAAG TACTAAGGGA AAGGGCAGGA ATTACAAATA CTGCAATGCC GACCACGGCC GATAATTACC TGAAAACCAA TTATTTTACA AACATATCAG ATGCAAATCT GTTGGAAATC CGCAGAGAAC GTGGCATCGA GCTTTCGATG GAAGGTTTCA GGTATGACGA CCTGATGCGC TGGAAGCTTG GCTCATTGTT GCTAAAACCT TATGATGGTC TGTATGTTCC GGCGCTGAAT ACCCTGTACG ATTTAAATGA AGATGGGGTA AACGATGTAT CCTTTGTAAA AACAGCGCCG GCCAATCCGG TAAAAGGTGT AGTTTATTTT GTAGTGAACG GTACGCAACA TTACCTGACA AATGATACCT TTGGTGTAAT TATTGTTCAG AACAATTTAA AAAGGGTATT TGAAGATTAT ATGTATCTAC AGCCCATACC TTATGACCAG ATTGTTTTAA ACCCTAAAAT AATCCAAAAC CCAATCTGGC CTACTAAATA A
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Protein sequence | MNYINTIINL SNHKMIMKRI IFIATIVLLA GCKKSFELYP PDKLAPANAF KTEKDLQLYA NSFYNALPTG NDIVRADGTS DFLAGSTVPA YIAGSYNAVQ APAATWSFTS LRNINYFLEH FGQASIPDEA KNHFEGLARF FRAWFYFDKV KQFGDVPWYD KTMDVSDPDI YKPRDPRDFV MKKVLADLDF AAANIRAAKD ASSSQINKWV ALAFKSRVCL YEGTFRKYHT EYSFTDASFW LEQSADAASK VMLGNQYQIN KEATLNMSYR NLFINELPKT NEVMLAAVNS LTLRVLNDAN WYWTSATYGR RLSFTKSFIN TFLKADGSRF TDQTGYNAIP FWNEVKGRDL RLQQTIRMGD YKREGAAAPP DFTYTYTGYM PYKFTLDAKT TDGKAENSNS LPIIRYAEVL LNFAEAKAEL GTFTVTDWNS TIKVLRERAG ITNTAMPTTA DNYLKTNYFT NISDANLLEI RRERGIELSM EGFRYDDLMR WKLGSLLLKP YDGLYVPALN TLYDLNEDGV NDVSFVKTAP ANPVKGVVYF VVNGTQHYLT NDTFGVIIVQ NNLKRVFEDY MYLQPIPYDQ IVLNPKIIQN PIWPTK
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