| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2246 |
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| Symbol | |
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| ID | 8253352 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2607323 |
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| End bp | 2607895 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 644935895 |
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| Product | RNA polymerase sigma factor, sigma-70 family |
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| Protein accession | YP_003092512 |
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| Protein GI | 255532140 |
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| COG category | [K] Transcription |
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| COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
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| TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 31 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGACCGATC AGGAACTTTG GAAAGCAATC AGGGAAGATG ACCCCAGGGC ATTTGCTGTG
CTTTTCGAGA AACATTGGTC TAAAATTTAC ACCACGGCAT TCTCCATGCT GAAAGATGCT
GAGGCCTGCT CTGGAATTGT ACACGATATT TTCCTTAACC TCTGGATCAA AAGAGAACAC
CTGAATATAG CATCTTTTCC TGCTTACCTG AAAGCTGCTG CGCGCTACCA TGTTTACAAA
TATATCAAAA GCTTAAAGGC CAGCCCTATC GATTATACCG ACGAGCCCCT ATCCCTGGAA
AAGGCAGTCA GCCAGAATAC CGGTGATGAG CGTATCAGGT ATATGGAACT GGAAAATAAA
GTGGAACTCT ACTTAAAGGA ATTGCCTAAG CGCTGCCAGG AGATCTTTAT ACTGAGCAGA
AAAGAAAACC TGAGTAATGA GGAAATTGCC AAACGCCTGG GCATTTCAAA AAGAACAGTA
GAAAATCAGC TCACCCATGC ACTCCATCAT TTACGGATCT CTATGAAAGA CCTGATTGTG
GTCCTTATCC TGCTGGAAAT TATGGGCCGC TAG
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| Protein sequence | MTDQELWKAI REDDPRAFAV LFEKHWSKIY TTAFSMLKDA EACSGIVHDI FLNLWIKREH
LNIASFPAYL KAAARYHVYK YIKSLKASPI DYTDEPLSLE KAVSQNTGDE RIRYMELENK
VELYLKELPK RCQEIFILSR KENLSNEEIA KRLGISKRTV ENQLTHALHH LRISMKDLIV
VLILLEIMGR
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