Gene Phep_2245 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2245 
Symbol 
ID8253351 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2605977 
End bp2607167 
Gene Length1191 bp 
Protein Length396 aa 
Translation table11 
GC content47% 
IMG OID644935894 
ProductFecR protein 
Protein accessionYP_003092511 
Protein GI255532139 
COG category[P] Inorganic ion transport and metabolism
[T] Signal transduction mechanisms 
COG ID[COG3712] Fe2+-dicitrate sensor, membrane component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCAAAG AAGATTACCT GAAACTGTAT GAAAAGTACC TTGCCGGCAC CTGTAGCCAG 
GCAGAGGAGG CTTTACTGAT GAATTATCAG GATGGTTTTG AGCTGCTTGA CCTGCCCTGG
GATACGAAAG AGATGGGCGA TCAGGAGCAG ACCAGGCAAA TGATCTTCAA CAGACTACAG
CCGGAAATCA GGCCGCGCAA AGTATTACGT TTAAATACCT TAGTAAGATG GTCTGCCGCC
GCAGTGCTGC TGCTGGCGCT GTCTGTAGGC CTTTACCGCT TAAATTCCCG CAAAGCAGCT
GTGCAGCTGG CCGGACAAGC AGTAAACAAA TTCTTTAAAA ATGACGTTCC TCCTGGAAAA
GATAAAGCTG TACTTACACT GGCTGATGGG TCGGAAATTG TGCTGGAAGG TAAAAAGAAT
GGAATATTGG CGCAGCAGGG TGCTGCAAAT CTGCGCATCG ATGGCGGGCA ACTGGTTTAC
GAACCTGCTG CTGGGCCTGA TGTTTCAGAT CAGCAGGTCA ATACGATCAG TATGCCGCGT
GGCGGAAAAT ATCAGGTAAT ATTGTCGGAT GGTACAAAAG TATGGTTAAA CGCCGCATCT
TCTTTAAGTT TTCCGGCGGT GTTCGGTACT AAAAAAAGGG TAGTCCGCTT AAAGGGCGAG
GCCTATTTTG AAGTTGCAAA AAGTAACAGG TTAAGCATAG TGAATGGAAA AGCAATAGCA
GAACGGGTTC CTTTTATAGT GGAAACTGCC GCGCAAAGTG TAGCGGTTTT GGGTACCCAT
TTCAACATCA GTTCATACGA TGAGGAAGTT ATGACCAGAA CAACCCTGCT GGAAGGCAGC
GTGCGTGTTT CGGCTATCAA AGGCAATATA CAGCAGCTGT TAAAACCCGG GCAGCAGGCA
TTGCTGAACC CTGAAAAGGG TAGCATAGCT GTTTCAGCGG CTAACCTGGA AGAGGCCATA
GCCTGGAAGA ACGACATATT TATGTTTGAA GATGAAGATA TCCATAGCAT CATGAGAAAA
ATATCACGGT GGTATGATGT AGAAGTGGTG TATAAGGGCG AGCTTAAAGG TACCAAATTT
GGCGGAACGG CTTCCCGTTC TGACAACCTT TCTGAGGTAC TTAAAGCATT GGAACTGACG
GGCACCATTC ACTTCAGTAT AAATGGCAGA ACGGTAACCG TAATGCCATA G
 
Protein sequence
MSKEDYLKLY EKYLAGTCSQ AEEALLMNYQ DGFELLDLPW DTKEMGDQEQ TRQMIFNRLQ 
PEIRPRKVLR LNTLVRWSAA AVLLLALSVG LYRLNSRKAA VQLAGQAVNK FFKNDVPPGK
DKAVLTLADG SEIVLEGKKN GILAQQGAAN LRIDGGQLVY EPAAGPDVSD QQVNTISMPR
GGKYQVILSD GTKVWLNAAS SLSFPAVFGT KKRVVRLKGE AYFEVAKSNR LSIVNGKAIA
ERVPFIVETA AQSVAVLGTH FNISSYDEEV MTRTTLLEGS VRVSAIKGNI QQLLKPGQQA
LLNPEKGSIA VSAANLEEAI AWKNDIFMFE DEDIHSIMRK ISRWYDVEVV YKGELKGTKF
GGTASRSDNL SEVLKALELT GTIHFSINGR TVTVMP