Gene Phep_2239 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2239 
Symbol 
ID8253345 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2591899 
End bp2593155 
Gene Length1257 bp 
Protein Length418 aa 
Translation table11 
GC content49% 
IMG OID644935888 
Producthypothetical protein 
Protein accessionYP_003092505 
Protein GI255532133 
COG category[S] Function unknown 
COG ID[COG4289] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0313142 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones27 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGTAAAAT TAAAAGATAC ACAGATGAAG AAAAATTGGA GCCTGACCGT AGCACTTTTC 
CTGATGATGG GCGTAGCAAA GCCCGATGCT TTTGCCGCCC GGCTACCTGC TCCGGACGCG
GGGCAGCAAC AAAGAAAATA CCTGGTACAG ACCTTAAGTA AAATTGCAGA TCCGGTATTG
AAGGTATTGA GCCAGAATAA ATTAAAAGAG CTAATGCCTG TTGAGGCAAA AACAGAGGGC
AGAAAAAATT ATACTTACCT GGAGGCTTTT GGGCGTTTAC TGGCGGGCAT GGCCCCCTGG
CTGGAACTGG GACCCGATAA AACAGAAGAG GGCCTGCTGC GAAAAAAATA CATAGAACTG
GCCAGAAAAG GAATCCACAA TGCGACAGAT CCCGAAGGGC CGGATTTTAT GAATTTCAAT
AAAGGCGGGC AGCCGCTGGT TGATGCTGCT TTTTTTGCCC AGGCATTGCT GAGAGCACCC
GGGCAGTTGT GGGAACCGCT GGACGAAAAA ACCAGGGCCA ATGTAATTGC TGCCTTAAAA
TCGTCTAGAG CCATTATCCC ATCCTACAGC AACTGGCTAA TGTTTAGTGC AACAATTGAA
GCAGCCTTGT TAAAATTTGA CAACTCGGGT GACAGGATGC GCATTGATTA TGCACTGAAA
TCGCATATGC TGTGGTATAA GGGTGATGGT GCTTATGGTG ACGGGCCTAA TTTCCATTGG
GATTATTACA ACAGCTTTGT GATCCAGCCT ATGCTGGTTG ATGTATGCGC TGTTTTGGCC
GGGCGAAAAA GTATAGATAA AAGAACATTT GACCTGGTAA ACAACAGGGC AAACCGCTAC
GCAGAAGTGC AGGAAAGGTT GATTTCTCCG GAAGGGACTT ATCCGCCCAT CGGGCGTTCC
CTGGCCTACA GGTTTGGTGC TTTCCAGAGC CTGGCACAGG CCGTATTGCG GAAAAACCTG
CCAAAAGAGC TGTTGCCCCA GCAGGTAAGA GCTGCCTTGT ATACCCTGAT CAGGAGGCAG
GTAGAAGCAC CAGGCACCTT TGACGAGGCC GGATGGCTAC GTATAGGGCT ATATGGATAT
CAGCCCGGCG TTGGTGAAGA ATATATTTCG ACAGGAAGCT TATATTTATG CTCGCAAGCC
TTTTTGATGT TGGGCTTACC GGCTGATGAC CCTTTCTGGA AAGGGCCTGA TGCCGACTGG
ACGGCAAAAA AGATCTGGAA AGGTCTGGAT GTAACAACAG ACCATGCCCG GGAGTAG
 
Protein sequence
MVKLKDTQMK KNWSLTVALF LMMGVAKPDA FAARLPAPDA GQQQRKYLVQ TLSKIADPVL 
KVLSQNKLKE LMPVEAKTEG RKNYTYLEAF GRLLAGMAPW LELGPDKTEE GLLRKKYIEL
ARKGIHNATD PEGPDFMNFN KGGQPLVDAA FFAQALLRAP GQLWEPLDEK TRANVIAALK
SSRAIIPSYS NWLMFSATIE AALLKFDNSG DRMRIDYALK SHMLWYKGDG AYGDGPNFHW
DYYNSFVIQP MLVDVCAVLA GRKSIDKRTF DLVNNRANRY AEVQERLISP EGTYPPIGRS
LAYRFGAFQS LAQAVLRKNL PKELLPQQVR AALYTLIRRQ VEAPGTFDEA GWLRIGLYGY
QPGVGEEYIS TGSLYLCSQA FLMLGLPADD PFWKGPDADW TAKKIWKGLD VTTDHARE