| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2230 |
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| Symbol | |
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| ID | 8253336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2580026 |
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| End bp | 2581810 |
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| Gene Length | 1785 bp |
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| Protein Length | 594 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 644935879 |
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| Product | glycoside hydrolase 15-related |
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| Protein accession | YP_003092496 |
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| Protein GI | 255532124 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3387] Glucoamylase and related glycosyl hydrolases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.904069 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGAGA GACACACCTA CCAAACGGGA ATTATTGGAA ATTGCGCTTA TCTTGCCCAC
ATCAATAAAA ATACAAATGT AGACTGGCTT TGCTGGCCAA GGTTTGACAG CAGCTTTGTA
TTTGGGGGCT TGCTGGATAA AGAAAAAGGC GGGGAATTTT CCGTATTACC AGCTGGTGAG
TATATATCGC GGCAGTATTA TCTGGAAAAT ACCAATGTCA TTTGTACCGA AATAAGCAAT
CCGGAAGGAA AATACAGGGT GATGGACTTT GCCCCCCGTT TTTATCAGTT TGAACGGTAT
TATAAACCCC TGATGCTGAT CAGAAAAATA GAGCCCCTGG AAGGTAATCC CAGGATAAGG
GTGAGATGTA AGCCGGTATA TGAATATGGG CGTAAAAAAC AAAAGGGCAG CAGGGGCAGC
AACCACATTG AATTTAATGG GGATGATGAG GATATGCAAC TGAGCACCAA TATTTCATTA
AGCTATATTG AAGATGAGAA ATATTTTGCT TTGAATGAGC CCAAATACCT GATACTGACT
TACGGGCATG AACTGGATGC ACCCATTATC AGCACTGCAG AGCGCTTTTT AAGGGAAACC
ATTAAATACT GGCGGACCTG GATCAAACAT TCTACGATTG CCGGTTTTTA CCAGTCGTAT
GTCATCCGTT CAGCTTTGAC CTTAAAAATT CATCAGTATG AGGATACAGG GGCCATTATT
GCAGCCAGTA CAACCAGCTT ACCGGAATCG GATGGGAGCG GCAGGAACTG GGACTACCGC
TATTGCTGGA TGCGCGACAC TTATTATGTG ATCACTTCAT TAAATCACAT TGGCCACTTT
GAAGAGATGG AGCGGTATTT CAATTACATT ACAGATATTT CTTTCAGGGA TGATGAACGA
TACCAGCCTT TGTTTGGCAT TGCCGGAGAA AGGGTACTTA CCGAGCGAAA ACTGGGGCAT
CTGAAGGGCT ATATGGGCAA CAAGCCAATC CGCGTAGGTA ACCAGGCTTA TGAACATATA
CAAAATGATA TTTATGGACA GGTTCTGGTT TCTATGCTGC CTTTATACAC AGATCACCGT
TTTATTTATT CTGAAAGAAA GGATTCTGAA AAATGGCTGG ATTATCTGCT GAAAAAGATA
GAACGTACAA TTGATGAGAA AGATGCAGGG ATATGGGAAT TCAGAAACAT TGCCAATACC
CATTGTTATA CCAATCTGTT TCAATGGGCT GGTGCCAATG CAGCCTTAAA AATGGCCAGA
ACAATAGGGA ATAAATTGTA TGAAGAACGT GCACAGATAT TAATTGATAA AGCCGCCAGG
CACATAGAGG ACTGTTATGA TCCGGTACGT AAGGTTTACA ACCATGCTGT AGGCAGTCCG
TATCTGGATG CCAGTACCCT GCAACTCATA TTAATGAATT ATTTAGATCC TTTATCACAA
AAAGCCAAAG ATCATCTGAT TGCCCTGGAG CAGGAACTAA AGGCCGAAAA CGGACTGTTC
TACAGGTATT TACATAAGGA TGATTTTGGC CGGCCTAAAA CCACCTTTCT AATCTGTGCG
TTCTGGTATG TGGAGGCCCT GGCCTGTGTT GGGCGCCTGG ATGATGCCAT CAAGGAGTTT
GAATCTATCA TTAAATATGC CAACCACCTG TTGTTGTTTA GTGAGGATGT TGATGAAAAT
GACGGCAGTC AGTGGGGCAA TTTTCCGCAG GCTTACAGTC ATGTTGGCCT GATGAATGCC
GCGCACAGGA TTGCGATAAA ACTGGACAGA CCTGTGTTTC TTTAA
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| Protein sequence | MTERHTYQTG IIGNCAYLAH INKNTNVDWL CWPRFDSSFV FGGLLDKEKG GEFSVLPAGE
YISRQYYLEN TNVICTEISN PEGKYRVMDF APRFYQFERY YKPLMLIRKI EPLEGNPRIR
VRCKPVYEYG RKKQKGSRGS NHIEFNGDDE DMQLSTNISL SYIEDEKYFA LNEPKYLILT
YGHELDAPII STAERFLRET IKYWRTWIKH STIAGFYQSY VIRSALTLKI HQYEDTGAII
AASTTSLPES DGSGRNWDYR YCWMRDTYYV ITSLNHIGHF EEMERYFNYI TDISFRDDER
YQPLFGIAGE RVLTERKLGH LKGYMGNKPI RVGNQAYEHI QNDIYGQVLV SMLPLYTDHR
FIYSERKDSE KWLDYLLKKI ERTIDEKDAG IWEFRNIANT HCYTNLFQWA GANAALKMAR
TIGNKLYEER AQILIDKAAR HIEDCYDPVR KVYNHAVGSP YLDASTLQLI LMNYLDPLSQ
KAKDHLIALE QELKAENGLF YRYLHKDDFG RPKTTFLICA FWYVEALACV GRLDDAIKEF
ESIIKYANHL LLFSEDVDEN DGSQWGNFPQ AYSHVGLMNA AHRIAIKLDR PVFL
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