| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2229 |
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| Symbol | |
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| ID | 8253335 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | + |
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| Start bp | 2577852 |
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| End bp | 2580029 |
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| Gene Length | 2178 bp |
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| Protein Length | 725 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 644935878 |
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| Product | trehalose-phosphatase |
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| Protein accession | YP_003092495 |
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| Protein GI | 255532123 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG0380] Trehalose-6-phosphate synthase |
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| TIGRFAM ID | [TIGR00685] trehalose-phosphatase
[TIGR01484] HAD-superfamily hydrolase, subfamily IIB
[TIGR02400] alpha,alpha-trehalose-phosphate synthase [UDP-forming] |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 25 |
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| Fosmid unclonability p-value | 0.967304 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATAACAA ATAGTAAAAC AATAATTGTA TCCAATCGCT TACCGGTTAA AATTACAGAA
GAAAACGGGG AATATATACT TAGCCCGAGT GAAGGCGGCC TGGCCACTGG TTTAGGTTCT
GTGTATAAAA GAAATAACAA CATCTGGATT GGCTGGCCGG GCATAGAAAT CCCTGAGCAC
CGGCAGGCTG AAGTCACCGA GAAACTAGCC GGTTTAAATC TTATACCTGT TTTCTTAAGT
AATGAAGAGA TCAGTCTATA TTACGAAGGC TTTTCAAATG AAGTACTCTG GCCGGTATTC
CATTATCTGG TTACTTACGC AAATTTTGAA CAGGCTTATT GGGATTCCTA CAAAACTGTA
AATGAGAAAT TTAAGGCGGT TACTTTAAAT CACCTTAACA GCGACGATAT CATATGGATT
CACGATTACC AGCTGCTCCT GCTGCCTTGT CTCATAAGGT CGGAGCAGCA GGAAGTTACC
ATAGGCTTTT TTCAGCACAT TCCTTTTCCT TCGTTTGAAA TTTTCCGGCT CATCCCCTGG
AGGGAACAAT TGATTGCGGG AATGCTGGGC GCTGATCTGC TGGGCTTTCA TACTTTTGAT
GATGCCAGAC ACTTTTTAAG TGCGGCATCC AGACTTTCTT CCAGTAACCT GTCGGACAAT
ATACTTATCT ATAAGAACCG ACAGGTAGTA GTAGAGGCTT TTCCAATGGG TATAGATGCA
GAAAAATTTG ATAAGCTGAC CAGAACGGAA AAAGTAGCCC GGTATACCAG CTCATTTAAA
GCCAGTCTGA AAAATGTAAA GACCATACTT ACTATTGACA GACTGGATTA CAGTAAGGGT
ATATTGCAAC GTTTACAGGC TTTTGAACTG CTGTTACAAC TACATCCTGA ATATATCGGT
AAACTTGCAC TTTACATGAT TGTTGTGCCT TCAAGGGATA CAGTACCCAG GTATAAAGAA
TTAAAAGATC AGATAGATCA GCTTGTAGGA AATATAAATG CCCGTTTCCG GACCATCAAC
TGGGTACCCG TACATTATTT TTACAGGTCA TTCTCTGTCG AATTTCTTTC GGCCATTTAC
AGTACGGCTG ATATCTGCCT CGTAACACCC ATGCGCGACG GGATGAACCT GGTTAGTAAA
GAATATGTGG CTTCAAGAAG CAACGGGGAT GGCGTACTGA TATTAAGTGA AATGGCCGGT
GCCTCAAAAG AACTAAATGA GGCCCTAATT GTAAACCCAA ATGACATTGG CAACATTATG
GAGGCTATTG TGCAGGCCAT AAACATGTCG CCTGAAGAGC AGCATAAAAG AATAAAAAGT
ATGCGTGCCA TTGTAAACAA GTTTAACATC CATCTTTGGG TCAAAAACTT TATGGATAAA
CTTAATGAAG TAAAATCGAT GCAGGAATCT TTACATACCA AACATGCAGT AGCAGCAGTA
AGGGCACAAA TTGCGGCAGA CTATAAAAAG GCAAAAGACC GGTATATTTT TCTGGATTAT
GATGGTACCC TGGTGGGTTT TAAAGGTGAT ATTGATCAGG CCTCACCTGA TGAGGAATTG
TATTCAATTT TAAACAAGCT GATCCTTGAC CCTGCAAACC GCGTAATACT GATCAGTGGA
CGCCGTTATC AGACCTTACA GCAATGGTTC GGACATTTAA ATCTGGATAT GATTGCCGAA
CACGGCGCAT GGCAGAAATA CAGGGATGCA GAATGGAAGG CCCTGCCCCT GCTTACCGAT
AAATGGAAAC AGGAGATCAG AACTGTACTG GATATCTATA CCGACCGCAC CCCTGGTTCT
TTTATCGAAG AAAAAAGTTA TTCGCTGGTT TGGCATTACC GTAAGGCCGA GGAAGGTTTG
GGCGAATTAA GGGCCAATGA GATCATCAAT CATTTGCGGA TGGTTATTGC CGATAAAGGA
CTGCAGATGA TGCCCGGAAA CAAGGTTATA GAATTTAAAA ATATTGAAGT AAACAAAGGT
AAAGCAGCAC AAAACTGGCT TTATGATAAC GATCCCGATT TTATACTGGC ACTTGGTGAT
GACCATACGG ACGAAGATAT CTTTAAAGCT TTAGCGCCCG AAGCATATAC CATTAAAGTG
GGCAGTAACA TTTCAGCGGC CCGGTATTAC CTCAAAGATT ATAAAGAAGT AAGAGAACTG
CTTAAAGACC TGTGTTAA
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| Protein sequence | MITNSKTIIV SNRLPVKITE ENGEYILSPS EGGLATGLGS VYKRNNNIWI GWPGIEIPEH
RQAEVTEKLA GLNLIPVFLS NEEISLYYEG FSNEVLWPVF HYLVTYANFE QAYWDSYKTV
NEKFKAVTLN HLNSDDIIWI HDYQLLLLPC LIRSEQQEVT IGFFQHIPFP SFEIFRLIPW
REQLIAGMLG ADLLGFHTFD DARHFLSAAS RLSSSNLSDN ILIYKNRQVV VEAFPMGIDA
EKFDKLTRTE KVARYTSSFK ASLKNVKTIL TIDRLDYSKG ILQRLQAFEL LLQLHPEYIG
KLALYMIVVP SRDTVPRYKE LKDQIDQLVG NINARFRTIN WVPVHYFYRS FSVEFLSAIY
STADICLVTP MRDGMNLVSK EYVASRSNGD GVLILSEMAG ASKELNEALI VNPNDIGNIM
EAIVQAINMS PEEQHKRIKS MRAIVNKFNI HLWVKNFMDK LNEVKSMQES LHTKHAVAAV
RAQIAADYKK AKDRYIFLDY DGTLVGFKGD IDQASPDEEL YSILNKLILD PANRVILISG
RRYQTLQQWF GHLNLDMIAE HGAWQKYRDA EWKALPLLTD KWKQEIRTVL DIYTDRTPGS
FIEEKSYSLV WHYRKAEEGL GELRANEIIN HLRMVIADKG LQMMPGNKVI EFKNIEVNKG
KAAQNWLYDN DPDFILALGD DHTDEDIFKA LAPEAYTIKV GSNISAARYY LKDYKEVREL
LKDLC
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