Gene Phep_2220 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2220 
Symbol 
ID8253326 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2561525 
End bp2563057 
Gene Length1533 bp 
Protein Length510 aa 
Translation table11 
GC content44% 
IMG OID644935869 
Producthypothetical protein 
Protein accessionYP_003092486 
Protein GI255532114 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0277051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.582705 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAGCAT TAAATAACAT AAAATACGGA TTGCTGCTCC TGATCTTCCT GGGCACTGGC 
TGTACTAAAT TTTTAGATGT GGAAAGACCG GATAACCTGA TCAAAGATAA TTTCTGGCAA
AACAGGGACC AGGTATATTC TTCTTTAATC GGGCTGTATA CAGCCATGAA CAGCTGTGTA
AGTTCATTCC AGGTATGGGG GGATAGCCGG TCTAGTCTAT ATGCGCCCGG AATAGGTACC
GAATTTACCA GTAACCATGC GCAATTCCTT TCGCACGATA TTTATACCAC AAATAGTCTT
ACCTCATGGG CCTCTGTATA TAAAGCAATT GGCTGGACCA ATGCTTTTAT CAAAAATGCC
CCTGAAGGCC CTAAAAATGA CCCCACTTTT AAAGTAGAAG AGCTACAACA AATGATGGGC
GAAGCTTATG CCCTTCGTGG TTTATTCTAC TTTTACCTGG TCCGTACTTT TAAAGAAGTA
CCTGTGATCA AAGAACCTTA TGAATCAGAT GCACAAACCT TCAATACAGC CGCTTCATCT
GAAAACGAGG TGCTTGATTT TATAGAGGAA GACCTTGGCA ATGCCCTGAA AATTGCGCCT
GAAACATTTA CCGATGCAAA GGAACGCCAT GGCAGGATCA CTAAAAATGC CATCAGGGCA
ATACTGGCCG ATGTCAAACT CTGGAGAAAT CAATATGCAG CCTGTATCGA TCTGTGCAAA
ACCATTGATG TAGCATACGC AAATTCTTTG GTAAGGCCGC TCGACTGGTA TACCATTTTT
TATCCCGGCA ATTCTACTGA ATCCATCTTC GAATTCCAGT ATGGCCTTCA GGGGCCATCC
TCACCATTGT ACAACTGGTT CTCTTTTCAT GATCAGGGCA AGGAGATCTA CCTGGCCAAT
TCAAAGAACA TCACTGCAAA TTCTGGTGAA TTTCTGTATC CAAGTACAGT ACCCGAACAT
ATCACTTCTG ATACCATACG GTTAAAACCC TATAGTGCCT TTAGCATGAC ATCCGCAGCA
AATGGCTATG CCTCAGCAAC TGAGGTATAT AAATTTCTGG GGCAGGCACC TTACCAGGTG
GCTTACAGGA GACAAAACGA CCGTACCTCC AATTACATTT TTTACCGCTA CCGCGAAATC
CTGCTGATGA AGGCCGAAGC TTATGCCATG CTCGGCCAGT ACGGCGAGGC CGAAAAGAAC
ATCAATATCA TCCGTAAGCA TTGCGATATA CCGGAACTTA CGCCTGGTGA AGGCGGTGAG
GGGGCCGAAT TTTTTACCAG GCTTTTGCTG GAAAGGGAAT TTGAGCTCGG GTTTGAAGGG
AAAGAATGGT TTGCCGCTGT AAGGGTAGCC AGAAGAACAG GATATGCTGA TGTTTTGCTG
GAAAAAGCAG CAAACAACCA TTCTATGAAA CTGGCTTACC AGGTAGTAAG GGCCAGGTTA
CTGAACCCGG AAAGCTGGTT TTTGCCCTAT TACAGAACAG AAGTTGAAAA CAACCCATTA
CTGGTACAAA AAGAATTTTA CAGGAACAAA TAA
 
Protein sequence
MKALNNIKYG LLLLIFLGTG CTKFLDVERP DNLIKDNFWQ NRDQVYSSLI GLYTAMNSCV 
SSFQVWGDSR SSLYAPGIGT EFTSNHAQFL SHDIYTTNSL TSWASVYKAI GWTNAFIKNA
PEGPKNDPTF KVEELQQMMG EAYALRGLFY FYLVRTFKEV PVIKEPYESD AQTFNTAASS
ENEVLDFIEE DLGNALKIAP ETFTDAKERH GRITKNAIRA ILADVKLWRN QYAACIDLCK
TIDVAYANSL VRPLDWYTIF YPGNSTESIF EFQYGLQGPS SPLYNWFSFH DQGKEIYLAN
SKNITANSGE FLYPSTVPEH ITSDTIRLKP YSAFSMTSAA NGYASATEVY KFLGQAPYQV
AYRRQNDRTS NYIFYRYREI LLMKAEAYAM LGQYGEAEKN INIIRKHCDI PELTPGEGGE
GAEFFTRLLL EREFELGFEG KEWFAAVRVA RRTGYADVLL EKAANNHSMK LAYQVVRARL
LNPESWFLPY YRTEVENNPL LVQKEFYRNK