Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2216 |
Symbol | |
ID | 8253322 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2553762 |
End bp | 2555720 |
Gene Length | 1959 bp |
Protein Length | 652 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644935865 |
Product | hypothetical protein |
Protein accession | YP_003092482 |
Protein GI | 255532110 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 29 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCAAAT TAAATAAGGA CATCATATTA AAATATATAC GCATGAAAAT ATACAGACCA ACAGCATATT TCTGCTTTGT GCTATGCATC AGTAGTCTGC TGATCACCAG CTGCTACAAG GAAGAACATT TTGATTTCCC CGGACCTTAT GAAGAAGCAA ATACCGTTAA CCCCGATTCA CTTCCTTTTC CATTTGATGT AAACAAGCAG GCAGGGGTAT GGCTGGTAAA AAATGGAGTG CCCGATTACG GAAAAGTACT GTTTAAAGGC TATACAGATT ATTACCCAAA AGGGGATACC CTTTCCTGGG TGAAGGAAAA CGACGGGTTA CACATGCTTC CGCATTTTAG CTTTTATCCT TTGTCCAATG CAGATCATTT TGCGGGTGAT CCCAACAGCT ATAAGTTCAA TTGGGTATAT TCCAAATACT TTGTTCCTGT AGGCTCCGGA AAAAGTTTCT ATATGTACGC TAAAGTTACA TTTGGCACAT TTAACAGTAC GGCTGCAGGT TTGTCTTTAG GAAAAAACTG GGATACAGGT GGTCCTTTTA CTTTTGGCCT TGATGGAAAT ACCTCAACCG GCGAACCTGG CTTTTTCCTC GACCTTTATG GTAAAAACGG AATAACAGTT AACCCTGCCC TGGGCTGGCC AACCGTAACC CAGGTAATGA CACCCGGTGT CCCTGCCAAT ATGGAAGTGG TCATCACCAA TGGGATTTTT TATGTAAAGG TAAATGGCAC GCTTGTATTC ACCTTTAAAA TGGCAGCCGA ACGGGCCTAT TTTTATACTC CGCAAATCCG CCCATGGCGC AACTTTGTTG CTGTACACGA CATGTACATA GAAAGCCGCG AAATGTATAC GCTTGATTAT GCCATGCATG AATACGAAGG AAGCTATAAC AAGATCCAGG CGCCCGCCCT GGCCAAAACC CCTAACGGAG AATTGCTGCT CTTTGCAGAA GGACGCTCTA CACCCACATC CGCCAAAGAA AGGGTAGCGC AAAATACCAT GCCGGTAGGC AATACCGATA TCATCATGAA AAGATCTGCT GATGGGGGCA ATACCTGGAG CAACCAGCTT ACTGTACTTG CAGGTAATGG CAGCAATTTA ACATATTGCT TTCCACAGGT GGTTACAACA GATAATGGCA AGATCATTTT ACAATACAGT ACCATAGGCG GTGCTTTCGC GGCCAATAGC AATGCCTTCA CTTATGATGT CAACTCACAG CGGATCTACC AGATTGAATC GAATGATAAC GGCCTAAGCT GGACAATACC GGTAGAAATC ACAGCTTTTA AAAATACTGC AGCAGGATAT ATTCAGGGTG GTGCCGTACA TGGTATTGCA CTTAAATCTG CCACCTACAA TAAACGCCTG GTTATGCCCC TTACTTACAG TACCAATGTG GTCAGAATGG CCCTTTCTGA TGACGGCGGG ATTACCTGGC GTCTCGGCAA GGCAATCAGT GGCAGCCGTT TAACGAAGGC CACTGTAGTC GAATTGTCGG ATGGCAGGTT AATGATGGTA GCGGGACATA CCAATACCAG CCCTAAAAAC AAACTGGTTT CCTATAGCAG TGATGGTGGC GACAACTGGA CTGCAGCAGC CAATATTTCC GCTGATGTAA AAACAGGAGA TTATGGACAT CTGTTCGGAG GAATCATCCT GAAAGGTAAA GACGGAGAAA TACTTTTGGT AAACCCGATC AACAGAGAAA CAGATACAGA AGTTAAAAAC AGTCCTACTT ATGCCGTGGC ACCTGTTGTT TTTAAAAGCA CCAGCAATGG GCAGGCTTAT ACTACAGTAG GGCCGCTTTT CTCAAGAGAG GCTTATTTTG GTTACAACGC CCCGATTGGA AACATGGATG GCATCGTATT GGACGATGGC AGGATTGTGA TCGCCGGAGA AGGAGGGGTA GAAAGTCCCG CCGAAGGGAT TGTGATCTAT AAGAAGTAG
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Protein sequence | MIKLNKDIIL KYIRMKIYRP TAYFCFVLCI SSLLITSCYK EEHFDFPGPY EEANTVNPDS LPFPFDVNKQ AGVWLVKNGV PDYGKVLFKG YTDYYPKGDT LSWVKENDGL HMLPHFSFYP LSNADHFAGD PNSYKFNWVY SKYFVPVGSG KSFYMYAKVT FGTFNSTAAG LSLGKNWDTG GPFTFGLDGN TSTGEPGFFL DLYGKNGITV NPALGWPTVT QVMTPGVPAN MEVVITNGIF YVKVNGTLVF TFKMAAERAY FYTPQIRPWR NFVAVHDMYI ESREMYTLDY AMHEYEGSYN KIQAPALAKT PNGELLLFAE GRSTPTSAKE RVAQNTMPVG NTDIIMKRSA DGGNTWSNQL TVLAGNGSNL TYCFPQVVTT DNGKIILQYS TIGGAFAANS NAFTYDVNSQ RIYQIESNDN GLSWTIPVEI TAFKNTAAGY IQGGAVHGIA LKSATYNKRL VMPLTYSTNV VRMALSDDGG ITWRLGKAIS GSRLTKATVV ELSDGRLMMV AGHTNTSPKN KLVSYSSDGG DNWTAAANIS ADVKTGDYGH LFGGIILKGK DGEILLVNPI NRETDTEVKN SPTYAVAPVV FKSTSNGQAY TTVGPLFSRE AYFGYNAPIG NMDGIVLDDG RIVIAGEGGV ESPAEGIVIY KK
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