| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Phep_2214 |
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| Symbol | |
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| ID | 8253320 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Pedobacter heparinus DSM 2366 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013061 |
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| Strand | - |
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| Start bp | 2551259 |
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| End bp | 2552908 |
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| Gene Length | 1650 bp |
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| Protein Length | 549 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 644935863 |
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| Product | glycosyl hydrolase BNR repeat-containing protein |
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| Protein accession | YP_003092480 |
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| Protein GI | 255532108 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG4409] Neuraminidase (sialidase) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 27 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGCGA TAAAGAGAAT TTTAAACATT AGTATTTTAT GTTGTTTGCT GCCGGTAATC
ACTGTGGCGC AGGCCAGTCA GGCCACACAA AAAAAATATA AGATCCCTGT ATTGAAGGGA
AGAGCTAACA ATCCGGTATT GCGCATTAAA ATTGAACTTA ACGAAGCAGC TGAATTGCAG
CAAATTGATA TCCTTACAAA AGGAACGCTC CGTCTAAATG ATATCCAGGA TGTCAAATTA
CTGGCCAGTG GAACGGACTC AGCGCTTTTT AAAGCTGAAA AGGCAGGAAT GCTAAGGCTT
TTTGCAGCAG CAAATGCTCC GCTAAAAGAA AAAACTTCAT TAACTGGTAA CCTGCCCTTA
CAAAAAGGGA TCAATTACCT CTGGTTAACC CTCAGCTTAA AAGCCACAGC AAATGCGGCC
TCATTCTTAA ACATCAATGC CACCCTTGTC AGGCTCAACA AGGACAGTTT AAAAATAACA
CCCGACAATT ATGCAAACCG CCTGGGCATC GCACTGCGAC AACACAATCA GGATCAGGTA
CATACTTACC GCATCCCCGG GCTTGCTACG GCCAATGACG GTACTTTACT GGGCATTTAT
GATGTACGCC GCGATAGCGG AAGGGATTTA CAGGGCAATA TCGACATTGG CCTGTCCCGC
AGTCTGGATA AAGGTAAGAC CTGGCAGCCC ATGCAAATTG TAATGGATAT GGGTACCTGG
GGCAATCTCC CTGAAAAATT TAATGGGGTA TCAGATGCCA ATATCCTGGT CGATAAAAAA
ACAGGCCATA TTTTCATCGC AGGGTTATGG ATGTATGGCG TGATCAATGA ACAGGGAAAA
TGGCTGGAAG GACTTACCGA ACAGAGTAAG GACTGGAACC ACCAGTGGAA AACCAAAGGT
TCACAGCCTG GTTTTGAGCC GAAACAGACC GCCCAGTTCC TGATCGTAAA AAGCACCGAT
CATGGCAAAA CCTGGAGTAA ACCGGTCAAT CTTACAAAAA TGTGTAAACA GGAAGACTGG
TGGCTTTGGG CACCGGCACC TGGTCAGGGC ATTACCATGA AGAATGGGAC ACTCGTATTT
CCAACCCAGG GTAGAAATGC AAGCGGTAAA GCTTTTTCTA ACCTCACCTA CAGCAGCGAT
GGTGGCCATA CCTGGAAAAC AAGCAGGGCA GCAACCCAGG AGTCCACTAC AGAAAATATG
GTTGTAGAAC TTACAGATGG CACATTGATG CTAAACATGC GGTCCAATGC CAACAGTAAA
GATACCAGCA GTACCAATGG AAGGGCCATT GCCATAACCA ATAATATGGG ACAGGACTGG
ACATTACACC CTACATCACA TCAGGCCTTG CCAGAGCCAA CCTGTATGGC CAGTATCATC
CGGCACGACT TTGTACAAAA TGGAAAGAAA AGGTCTGTAT TGCTCTTTTC TAATCCGGAT
GCTAAAACAG CCCGTAAAAA TATGACCATC AAAGTAAGTT ACGATGATGG CAAAACCTGG
TCCTCAGATA AAAAGATCCT GCTGGATGAA GAAAAGAGCA GGGGATACTC CTGCCTGACC
AGTATCGACA ACAATACCAT CGGAATTCTG TATGAAGGCA GTCAGGCCGA CATGGTATTC
CAGACCATAA AACTGGACGA ACTACTTTAA
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| Protein sequence | MKAIKRILNI SILCCLLPVI TVAQASQATQ KKYKIPVLKG RANNPVLRIK IELNEAAELQ
QIDILTKGTL RLNDIQDVKL LASGTDSALF KAEKAGMLRL FAAANAPLKE KTSLTGNLPL
QKGINYLWLT LSLKATANAA SFLNINATLV RLNKDSLKIT PDNYANRLGI ALRQHNQDQV
HTYRIPGLAT ANDGTLLGIY DVRRDSGRDL QGNIDIGLSR SLDKGKTWQP MQIVMDMGTW
GNLPEKFNGV SDANILVDKK TGHIFIAGLW MYGVINEQGK WLEGLTEQSK DWNHQWKTKG
SQPGFEPKQT AQFLIVKSTD HGKTWSKPVN LTKMCKQEDW WLWAPAPGQG ITMKNGTLVF
PTQGRNASGK AFSNLTYSSD GGHTWKTSRA ATQESTTENM VVELTDGTLM LNMRSNANSK
DTSSTNGRAI AITNNMGQDW TLHPTSHQAL PEPTCMASII RHDFVQNGKK RSVLLFSNPD
AKTARKNMTI KVSYDDGKTW SSDKKILLDE EKSRGYSCLT SIDNNTIGIL YEGSQADMVF
QTIKLDELL
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