Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Phep_2214 |
Symbol | |
ID | 8253320 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Pedobacter heparinus DSM 2366 |
Kingdom | Bacteria |
Replicon accession | NC_013061 |
Strand | - |
Start bp | 2551259 |
End bp | 2552908 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 644935863 |
Product | glycosyl hydrolase BNR repeat-containing protein |
Protein accession | YP_003092480 |
Protein GI | 255532108 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG4409] Neuraminidase (sialidase) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 27 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAGCGA TAAAGAGAAT TTTAAACATT AGTATTTTAT GTTGTTTGCT GCCGGTAATC ACTGTGGCGC AGGCCAGTCA GGCCACACAA AAAAAATATA AGATCCCTGT ATTGAAGGGA AGAGCTAACA ATCCGGTATT GCGCATTAAA ATTGAACTTA ACGAAGCAGC TGAATTGCAG CAAATTGATA TCCTTACAAA AGGAACGCTC CGTCTAAATG ATATCCAGGA TGTCAAATTA CTGGCCAGTG GAACGGACTC AGCGCTTTTT AAAGCTGAAA AGGCAGGAAT GCTAAGGCTT TTTGCAGCAG CAAATGCTCC GCTAAAAGAA AAAACTTCAT TAACTGGTAA CCTGCCCTTA CAAAAAGGGA TCAATTACCT CTGGTTAACC CTCAGCTTAA AAGCCACAGC AAATGCGGCC TCATTCTTAA ACATCAATGC CACCCTTGTC AGGCTCAACA AGGACAGTTT AAAAATAACA CCCGACAATT ATGCAAACCG CCTGGGCATC GCACTGCGAC AACACAATCA GGATCAGGTA CATACTTACC GCATCCCCGG GCTTGCTACG GCCAATGACG GTACTTTACT GGGCATTTAT GATGTACGCC GCGATAGCGG AAGGGATTTA CAGGGCAATA TCGACATTGG CCTGTCCCGC AGTCTGGATA AAGGTAAGAC CTGGCAGCCC ATGCAAATTG TAATGGATAT GGGTACCTGG GGCAATCTCC CTGAAAAATT TAATGGGGTA TCAGATGCCA ATATCCTGGT CGATAAAAAA ACAGGCCATA TTTTCATCGC AGGGTTATGG ATGTATGGCG TGATCAATGA ACAGGGAAAA TGGCTGGAAG GACTTACCGA ACAGAGTAAG GACTGGAACC ACCAGTGGAA AACCAAAGGT TCACAGCCTG GTTTTGAGCC GAAACAGACC GCCCAGTTCC TGATCGTAAA AAGCACCGAT CATGGCAAAA CCTGGAGTAA ACCGGTCAAT CTTACAAAAA TGTGTAAACA GGAAGACTGG TGGCTTTGGG CACCGGCACC TGGTCAGGGC ATTACCATGA AGAATGGGAC ACTCGTATTT CCAACCCAGG GTAGAAATGC AAGCGGTAAA GCTTTTTCTA ACCTCACCTA CAGCAGCGAT GGTGGCCATA CCTGGAAAAC AAGCAGGGCA GCAACCCAGG AGTCCACTAC AGAAAATATG GTTGTAGAAC TTACAGATGG CACATTGATG CTAAACATGC GGTCCAATGC CAACAGTAAA GATACCAGCA GTACCAATGG AAGGGCCATT GCCATAACCA ATAATATGGG ACAGGACTGG ACATTACACC CTACATCACA TCAGGCCTTG CCAGAGCCAA CCTGTATGGC CAGTATCATC CGGCACGACT TTGTACAAAA TGGAAAGAAA AGGTCTGTAT TGCTCTTTTC TAATCCGGAT GCTAAAACAG CCCGTAAAAA TATGACCATC AAAGTAAGTT ACGATGATGG CAAAACCTGG TCCTCAGATA AAAAGATCCT GCTGGATGAA GAAAAGAGCA GGGGATACTC CTGCCTGACC AGTATCGACA ACAATACCAT CGGAATTCTG TATGAAGGCA GTCAGGCCGA CATGGTATTC CAGACCATAA AACTGGACGA ACTACTTTAA
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Protein sequence | MKAIKRILNI SILCCLLPVI TVAQASQATQ KKYKIPVLKG RANNPVLRIK IELNEAAELQ QIDILTKGTL RLNDIQDVKL LASGTDSALF KAEKAGMLRL FAAANAPLKE KTSLTGNLPL QKGINYLWLT LSLKATANAA SFLNINATLV RLNKDSLKIT PDNYANRLGI ALRQHNQDQV HTYRIPGLAT ANDGTLLGIY DVRRDSGRDL QGNIDIGLSR SLDKGKTWQP MQIVMDMGTW GNLPEKFNGV SDANILVDKK TGHIFIAGLW MYGVINEQGK WLEGLTEQSK DWNHQWKTKG SQPGFEPKQT AQFLIVKSTD HGKTWSKPVN LTKMCKQEDW WLWAPAPGQG ITMKNGTLVF PTQGRNASGK AFSNLTYSSD GGHTWKTSRA ATQESTTENM VVELTDGTLM LNMRSNANSK DTSSTNGRAI AITNNMGQDW TLHPTSHQAL PEPTCMASII RHDFVQNGKK RSVLLFSNPD AKTARKNMTI KVSYDDGKTW SSDKKILLDE EKSRGYSCLT SIDNNTIGIL YEGSQADMVF QTIKLDELL
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