Gene Phep_2212 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPhep_2212 
Symbol 
ID8253318 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePedobacter heparinus DSM 2366 
KingdomBacteria 
Replicon accessionNC_013061 
Strand
Start bp2549236 
End bp2550297 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content49% 
IMG OID644935861 
ProductKelch repeat-containing protein 
Protein accessionYP_003092478 
Protein GI255532106 
COG category[S] Function unknown 
COG ID[COG3055] Uncharacterized protein conserved in bacteria 
TIGRFAM ID[TIGR03548] cyclically-permuted mutatrotase family protein 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.556252 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones26 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATAAAC CGGTCTATCT ATTTCTATTG CTGATCCTGA TGTCTACAAT GCTAAGCAGG 
GGTGTAGCGC AAACTGCCAA ATCTGATTCC GGCTGGTCTG AACTTCCCCC CATTCCCGAT
CCCATTGGCT TTGCCGGCTC TTTTGCCGGG GTTTCAAATG GTACGTTACT GGTGGCTGGT
GGTGCAAACT TCCCCGATGG TGGTGCACCA TGGACAGGCT CTAAAAAAGC CTGGCACGAT
CATATATTTG CCCTTCAAAA ACCTGATGGC AAATGGAAAC TGGTCGGAAA GCTACCTCAT
TCATTGGGCT ATGGCCTTTC CATCACCTGG AAAGATAGCT TTATCATCAT TGGCGGTAGT
AATGAAAAAG GTCATTATGC CGACGTATCC ATGTTAAAAT TCAATAAGGG CAAACTCAGC
ATAACAACCC TGCCCGTATT GCCTAAACCC ATCGCCAATA CCTCGGGGGT ACTCCTCGGC
AATACCATTT ACATCGCCGG CGGCATCGAA AGCCCCGATG CCCAAAATGC CGGAGATAAC
TTCTGGGCAA TGGATCTTTC CGCCAAAAAC ATGGAATGGA AAAAACTTGA ACCCTGGCCA
GGCCCGGCCC GCATGTTTGC AGTTTCCGGT GCCCTGGACG GTAAATTTTA CCTGTTCAGC
GGTGCCGAAC TGGTACACGG GGTAAGAAAT TACCTTAAAG ATGCTTATCA GTACAGCCCT
AAAACCGGCT GGAAAAAGAT TGCCGACCTT CCTTCGGCCG TAACTGCGGC CCCGGGTACG
GCTTATGCCA CCGAAAACAG CCTCCGCATA TTTGGTGGCG ATGATGGTAA GGCCGCCGCC
GATGTCGCTC TACCAAGAGA AAAACACCCC GGCTTTTCAA AACAGGTGCT GAGCTATAGT
CCGCTTACCA ATACCTGGTC AGTAGCAGAT CAGATTCCGG CACCAGCGCC GGTAACCACT
ACCTTAGCCA TTTGGAACGG AAATGTGGTC ATTCCCGGAG GTGAAGTAAA ACCTGCAGTA
CGTACACCTA AAGTATTGAT GTATAAAACC ATTAAACACT AA
 
Protein sequence
MNKPVYLFLL LILMSTMLSR GVAQTAKSDS GWSELPPIPD PIGFAGSFAG VSNGTLLVAG 
GANFPDGGAP WTGSKKAWHD HIFALQKPDG KWKLVGKLPH SLGYGLSITW KDSFIIIGGS
NEKGHYADVS MLKFNKGKLS ITTLPVLPKP IANTSGVLLG NTIYIAGGIE SPDAQNAGDN
FWAMDLSAKN MEWKKLEPWP GPARMFAVSG ALDGKFYLFS GAELVHGVRN YLKDAYQYSP
KTGWKKIADL PSAVTAAPGT AYATENSLRI FGGDDGKAAA DVALPREKHP GFSKQVLSYS
PLTNTWSVAD QIPAPAPVTT TLAIWNGNVV IPGGEVKPAV RTPKVLMYKT IKH